Literature DB >> 17905190

Real-time measurement of pyrophosphate release kinetics.

Jeremiah W Hanes1, Kenneth A Johnson.   

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Year:  2007        PMID： 17905190      PMCID： PMC3381508          DOI： 10.1016/j.ab.2007.08.004

Source DB:  PubMed          Journal:  Anal Biochem        ISSN： 0003-2697            Impact factor:   3.365


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  12 in total

1.  Kinetics of nucleoside triphosphate cleavage and phosphate release steps by associated rabbit skeletal actomyosin, measured using a novel fluorescent probe for phosphate.

Authors:  H D White; B Belknap; M R Webb
Journal:  Biochemistry       Date:  1997-09-30       Impact factor: 3.162

2.  ATPase kinetics on activation of rabbit and frog permeabilized isometric muscle fibres: a real time phosphate assay.

Authors:  Z H He; R K Chillingworth; M Brune; J E Corrie; D R Trentham; M R Webb; M A Ferenczi
Journal:  J Physiol       Date:  1997-05-15       Impact factor: 5.182

3.  The efficiency of contraction in rabbit skeletal muscle fibres, determined from the rate of release of inorganic phosphate.

Authors:  Z H He; R K Chillingworth; M Brune; J E Corrie; M R Webb; M A Ferenczi
Journal:  J Physiol       Date:  1999-06-15       Impact factor: 5.182

4.  A new method for the time-resolved measurement of phosphate release in permeabilized muscle fibers.

Authors:  M A Ferenczi; Z H He; R K Chillingworth; M Brune; J E Corrie; D R Trentham; M R Webb
Journal:  Biophys J       Date:  1995-04       Impact factor: 4.033

5.  Phosphate release during microtubule assembly: what stabilizes growing microtubules?

Authors:  A Vandecandelaere; M Brune; M R Webb; S R Martin; P M Bayley
Journal:  Biochemistry       Date:  1999-06-22       Impact factor: 3.162

6.  Mechanism by which metal cofactors control substrate specificity in pyrophosphatase.

Authors:  Anton B Zyryanov; Alexander S Shestakov; Reijo Lahti; Alexander A Baykov
Journal:  Biochem J       Date:  2002-11-01       Impact factor: 3.857

7.  Direct, real-time measurement of rapid inorganic phosphate release using a novel fluorescent probe and its application to actomyosin subfragment 1 ATPase.

Authors:  M Brune; J L Hunter; J E Corrie; M R Webb
Journal:  Biochemistry       Date:  1994-07-12       Impact factor: 3.162

8.  Crystal structure of phosphate binding protein labeled with a coumarin fluorophore, a probe for inorganic phosphate.

Authors:  M Hirshberg; K Henrick; L L Haire; N Vasisht; M Brune; J E Corrie; M R Webb
Journal:  Biochemistry       Date:  1998-07-21       Impact factor: 3.162

9.  Mechanism of inorganic phosphate interaction with phosphate binding protein from Escherichia coli.

Authors:  M Brune; J L Hunter; S A Howell; S R Martin; T L Hazlett; J E Corrie; M R Webb
Journal:  Biochemistry       Date:  1998-07-21       Impact factor: 3.162

10.  ATPase and shortening rates in frog fast skeletal myofibrils by time-resolved measurements of protein-bound and free Pi.

Authors:  T Barman; M Brune; C Lionne; N Piroddi; C Poggesi; R Stehle; C Tesi; F Travers; M R Webb
Journal:  Biophys J       Date:  1998-06       Impact factor: 4.033
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  12 in total

1.  Nucleotide-dependent conformational change governs specificity and analog discrimination by HIV reverse transcriptase.

Authors:  Matthew W Kellinger; Kenneth A Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

2.  Measurement of Nucleotide Hydrolysis Using Fluorescent Biosensors for Phosphate.

Authors:  Simone Kunzelmann
Journal:  Methods Mol Biol       Date:  2021

3.  Effect of the Y955C mutation on mitochondrial DNA polymerase nucleotide incorporation efficiency and fidelity.

Authors:  Patricia A Estep; Kenneth A Johnson
Journal:  Biochemistry       Date:  2011-07-05       Impact factor: 3.162

Review 4.  The Mechanisms of Substrate Selection, Catalysis, and Translocation by the Elongating RNA Polymerase.

Authors:  Georgiy A Belogurov; Irina Artsimovitch
Journal:  J Mol Biol       Date:  2019-05-31       Impact factor: 5.469

5.  HIV-1 Reverse Transcriptase Polymerase and RNase H (Ribonuclease H) Active Sites Work Simultaneously and Independently.

Authors:  An Li; Jiawen Li; Kenneth A Johnson
Journal:  J Biol Chem       Date:  2016-10-24       Impact factor: 5.157

6.  Synthetic pathway for production of five-carbon alcohols from isopentenyl diphosphate.

Authors:  Howard H Chou; Jay D Keasling
Journal:  Appl Environ Microbiol       Date:  2012-08-31       Impact factor: 4.792

7.  Elucidation of kinetic mechanisms of human translesion DNA polymerase κ using tryptophan mutants.

Authors:  Linlin Zhao; Matthew G Pence; Robert L Eoff; Shuai Yuan; Catinca A Fercu; F Peter Guengerich
Journal:  FEBS J       Date:  2014-08-14       Impact factor: 5.542

8.  Rate-limiting Pyrophosphate Release by HIV Reverse Transcriptase Improves Fidelity.

Authors:  An Li; Shanzhong Gong; Kenneth A Johnson
Journal:  J Biol Chem       Date:  2016-10-24       Impact factor: 5.157

9.  Kinetic analysis of correct nucleotide insertion by a Y-family DNA polymerase reveals conformational changes both prior to and following phosphodiester bond formation as detected by tryptophan fluorescence.

Authors:  Jeff W Beckman; Qixin Wang; F Peter Guengerich
Journal:  J Biol Chem       Date:  2008-11-04       Impact factor: 5.157

Review 10.  The kinetic and chemical mechanism of high-fidelity DNA polymerases.

Authors:  Kenneth A Johnson
Journal:  Biochim Biophys Acta       Date:  2010-01-15
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