Literature DB >> 17902097

High-speed atomic force microscopy for observing dynamic biomolecular processes.

Toshio Ando1, Takayuki Uchihashi, Noriyuki Kodera, Daisuke Yamamoto, Masaaki Taniguchi, Atsushi Miyagi, Hayato Yamashita.   

Abstract

The atomic force microscope (AFM) is unique in its capability to capture high-resolution images of biological samples in liquids. This capability will become more valuable to biological sciences if AFM additionally acquires an ability of high-speed imaging, because 'direct and real-time visualization' is a straightforward and powerful means to understand biomolecular processes. With conventional AFMs, it takes more than a minute to capture an image, while biomolecular processes generally occur on a millisecond timescale or less. In order to fill this large gap, various efforts have been carried out in the past decade. Here, we review these past efforts, describe the current state of the capability and limitations of high-speed AFM, and discuss possibilities that may break the limitations and lead to the development of a truly useful high-speed AFM for biological sciences. Copyright (c) 2007 John Wiley & Sons, Ltd.

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Mesh:

Year:  2007        PMID: 17902097     DOI: 10.1002/jmr.843

Source DB:  PubMed          Journal:  J Mol Recognit        ISSN: 0952-3499            Impact factor:   2.137


  14 in total

1.  DockAFM: benchmarking protein structures by docking under AFM topographs.

Authors:  Rui C Chaves; Jean-Luc Pellequer
Journal:  Bioinformatics       Date:  2013-09-26       Impact factor: 6.937

2.  Contact-mode high-resolution high-speed atomic force microscopy movies of the purple membrane.

Authors:  Ignacio Casuso; Noriyuki Kodera; Christian Le Grimellec; Toshio Ando; Simon Scheuring
Journal:  Biophys J       Date:  2009-09-02       Impact factor: 4.033

3.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

4.  Visualization of DNA and protein-DNA complexes with atomic force microscopy.

Authors:  Yuri L Lyubchenko; Alexander A Gall; Luda S Shlyakhtenko
Journal:  Methods Mol Biol       Date:  2014

5.  Mica functionalization for imaging of DNA and protein-DNA complexes with atomic force microscopy.

Authors:  Luda S Shlyakhtenko; Alexander A Gall; Yuri L Lyubchenko
Journal:  Methods Mol Biol       Date:  2013

Review 6.  Preparation of DNA and nucleoprotein samples for AFM imaging.

Authors:  Yuri L Lyubchenko
Journal:  Micron       Date:  2010-09-09       Impact factor: 2.251

Review 7.  Imaging of nucleic acids with atomic force microscopy.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko; Toshio Ando
Journal:  Methods       Date:  2011-02-16       Impact factor: 3.608

8.  Deciphering the structure, growth and assembly of amyloid-like fibrils using high-speed atomic force microscopy.

Authors:  Pierre-Emmanuel Milhiet; Daisuke Yamamoto; Olivia Berthoumieu; Patrice Dosset; Christian Le Grimellec; Jean-Michel Verdier; Stéphane Marchal; Toshio Ando
Journal:  PLoS One       Date:  2010-10-08       Impact factor: 3.240

9.  Dynamics of nucleosomes revealed by time-lapse atomic force microscopy.

Authors:  Luda S Shlyakhtenko; Alexander Y Lushnikov; Yuri L Lyubchenko
Journal:  Biochemistry       Date:  2009-08-25       Impact factor: 3.162

Review 10.  Filming biomolecular processes by high-speed atomic force microscopy.

Authors:  Toshio Ando; Takayuki Uchihashi; Simon Scheuring
Journal:  Chem Rev       Date:  2014-01-30       Impact factor: 60.622

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