Literature DB >> 17893748

Bacterial DNA repair genes and their eukaryotic homologues: 1. Mutations in genes involved in base excision repair (BER) and DNA-end processors and their implication in mutagenesis and human disease.

Joanna Krwawicz1, Katarzyna D Arczewska, Elzbieta Speina, Agnieszka Maciejewska, Elzbieta Grzesiuk.   

Abstract

Base excision repair (BER) pathway executed by a complex network of proteins is the major system responsible for the removal of damaged DNA bases and repair of DNA single strand breaks (SSBs) generated by environmental agents, such as certain cancer therapies, or arising spontaneously during cellular metabolism. Both modified DNA bases and SSBs with ends other than 3'-OH and 5'-P are repaired either by replacement of a single or of more nucleotides in the processes called short-patch BER (SP-BER) or long-patch BER (LP-BER), respectively. In contrast to Escherichia coli cells, in human ones, the two BER sub-pathways are operated by different sets of proteins. In this review the selection between SP- and LP-BER and mutations in BER and end-processors genes and their contribution to bacterial mutagenesis and human diseases are considered.

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Year:  2007        PMID: 17893748

Source DB:  PubMed          Journal:  Acta Biochim Pol        ISSN: 0001-527X            Impact factor:   2.149


  20 in total

1.  Intrinsic apurinic/apyrimidinic (AP) endonuclease activity enables Bacillus subtilis DNA polymerase X to recognize, incise, and further repair abasic sites.

Authors:  Benito Baños; Laurentino Villar; Margarita Salas; Miguel de Vega
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

2.  Abasic sites and strand breaks in DNA cause transcriptional mutagenesis in Escherichia coli.

Authors:  Cheryl L Clauson; Kenneth J Oestreich; James W Austin; Paul W Doetsch
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

3.  Replisome activity slowdown after exposure to ultraviolet light in Escherichia coli.

Authors:  Nicolas Soubry; Andrea Wang; Rodrigo Reyes-Lamothe
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-24       Impact factor: 11.205

4.  AlkB dioxygenase preferentially repairs protonated substrates: specificity against exocyclic adducts and molecular mechanism of action.

Authors:  Agnieszka M Maciejewska; Jaroslaw Poznanski; Zuzanna Kaczmarska; Beata Krowisz; Jadwiga Nieminuszczy; Agnieszka Polkowska-Nowakowska; Elzbieta Grzesiuk; Jaroslaw T Kusmierek
Journal:  J Biol Chem       Date:  2012-11-12       Impact factor: 5.157

Review 5.  DNA repair and genome maintenance in Bacillus subtilis.

Authors:  Justin S Lenhart; Jeremy W Schroeder; Brian W Walsh; Lyle A Simmons
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

Review 6.  The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species.

Authors:  Monika Schmoll; Christoph Dattenböck; Nohemí Carreras-Villaseñor; Artemio Mendoza-Mendoza; Doris Tisch; Mario Ivan Alemán; Scott E Baker; Christopher Brown; Mayte Guadalupe Cervantes-Badillo; José Cetz-Chel; Gema Rosa Cristobal-Mondragon; Luis Delaye; Edgardo Ulises Esquivel-Naranjo; Alexa Frischmann; Jose de Jesus Gallardo-Negrete; Monica García-Esquivel; Elida Yazmin Gomez-Rodriguez; David R Greenwood; Miguel Hernández-Oñate; Joanna S Kruszewska; Robert Lawry; Hector M Mora-Montes; Tania Muñoz-Centeno; Maria Fernanda Nieto-Jacobo; Guillermo Nogueira Lopez; Vianey Olmedo-Monfil; Macario Osorio-Concepcion; Sebastian Piłsyk; Kyle R Pomraning; Aroa Rodriguez-Iglesias; Maria Teresa Rosales-Saavedra; J Alejandro Sánchez-Arreguín; Verena Seidl-Seiboth; Alison Stewart; Edith Elena Uresti-Rivera; Chih-Li Wang; Ting-Fang Wang; Susanne Zeilinger; Sergio Casas-Flores; Alfredo Herrera-Estrella
Journal:  Microbiol Mol Biol Rev       Date:  2016-02-10       Impact factor: 11.056

7.  REPAIRtoire--a database of DNA repair pathways.

Authors:  Kaja Milanowska; Joanna Krwawicz; Grzegorz Papaj; Jan Kosinski; Katarzyna Poleszak; Justyna Lesiak; Ewelina Osinska; Kristian Rother; Janusz M Bujnicki
Journal:  Nucleic Acids Res       Date:  2010-11-04       Impact factor: 16.971

8.  DNAtraffic--a new database for systems biology of DNA dynamics during the cell life.

Authors:  Krzysztof Kuchta; Daniela Barszcz; Elzbieta Grzesiuk; Pawel Pomorski; Joanna Krwawicz
Journal:  Nucleic Acids Res       Date:  2011-11-22       Impact factor: 16.971

9.  Databases and bioinformatics tools for the study of DNA repair.

Authors:  Kaja Milanowska; Kristian Rother; Janusz M Bujnicki
Journal:  Mol Biol Int       Date:  2011-07-14

10.  Editing of misaligned 3'-termini by an intrinsic 3'-5' exonuclease activity residing in the PHP domain of a family X DNA polymerase.

Authors:  Benito Baños; José M Lázaro; Laurentino Villar; Margarita Salas; Miguel de Vega
Journal:  Nucleic Acids Res       Date:  2008-09-06       Impact factor: 16.971

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