Literature DB >> 17890363

An interrelationship between autophagy and filamentous growth in budding yeast.

Jun Ma1, Rui Jin, Xiaoyu Jia, Craig J Dobry, Li Wang, Fulvio Reggiori, Ji Zhu, Anuj Kumar.   

Abstract

Over the last 15 years, yeast pseudohyphal growth (PHG) has been the focus of intense research interest as a model of fungal pathogenicity. Specifically, PHG is a stress response wherein yeast cells deprived of nitrogen form filaments of elongated cells. Nitrogen limitation also induces autophagy, a ubiquitous eukaryotic stress response in which proteins are trafficked to the vacuole/lysosome for degradation and recycling. Although autophagy and filamentous growth are both responsive to nitrogen stress, a link between these processes has not been investigated to date. Here, we present several studies describing an interrelationship between autophagy and filamentous growth. By microarray-based expression profiling, we detect extensive upregulation of the pathway governing autophagy during early PHG and find both processes active under conditions of nitrogen stress in a filamentous strain of budding yeast. Inhibition of autophagy results in increased PHG, and autophagy-deficient yeast induce PHG at higher concentrations of available nitrogen. Our results suggest a model in which autophagy mitigates nutrient stress, delaying the onset of PHG; conversely, inhibition of autophagy exacerbates nitrogen stress, resulting in precocious and overactive PHG. This physiological connection highlights the central role of autophagy in regulating the cell's nutritional state and the responsiveness of PHG to that state.

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Year:  2007        PMID: 17890363      PMCID: PMC2013727          DOI: 10.1534/genetics.107.076596

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  57 in total

1.  Apg1p, a novel protein kinase required for the autophagic process in Saccharomyces cerevisiae.

Authors:  A Matsuura; M Tsukada; Y Wada; Y Ohsumi
Journal:  Gene       Date:  1997-06-19       Impact factor: 3.688

2.  A Saccharomyces gene family involved in invasive growth, cell-cell adhesion, and mating.

Authors:  B Guo; C A Styles; Q Feng; G R Fink
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

3.  MSS11, a novel yeast gene involved in the regulation of starch metabolism.

Authors:  A L Webber; M G Lambrechts; I S Pretorius
Journal:  Curr Genet       Date:  1997-10       Impact factor: 3.886

4.  Combinatorial control required for the specificity of yeast MAPK signaling.

Authors:  H D Madhani; G R Fink
Journal:  Science       Date:  1997-02-28       Impact factor: 47.728

5.  Molecular cloning and analysis of the dominant flocculation gene FLO8 from Saccharomyces cerevisiae.

Authors:  O Kobayashi; H Suda; T Ohtani; H Sone
Journal:  Mol Gen Genet       Date:  1996-07-26

6.  Functional analysis of the interaction between the small GTP binding protein Cdc42 and the Ste20 protein kinase in yeast.

Authors:  M Peter; A M Neiman; H O Park; M van Lohuizen; I Herskowitz
Journal:  EMBO J       Date:  1996-12-16       Impact factor: 11.598

7.  Saccharomyces cerevisiae S288C has a mutation in FLO8, a gene required for filamentous growth.

Authors:  H Liu; C A Styles; G R Fink
Journal:  Genetics       Date:  1996-11       Impact factor: 4.562

8.  Development of pseudohyphae by embedded haploid and diploid yeast.

Authors:  W S Lo; E I Raitses; A M Dranginis
Journal:  Curr Genet       Date:  1997-09       Impact factor: 3.886

9.  Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.

Authors:  M S Longtine; A McKenzie; D J Demarini; N G Shah; A Wach; A Brachat; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

10.  Inhibitory and activating functions for MAPK Kss1 in the S. cerevisiae filamentous-growth signalling pathway.

Authors:  J G Cook; L Bardwell; J Thorner
Journal:  Nature       Date:  1997-11-06       Impact factor: 49.962

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  18 in total

1.  Quantitation of autophagy by luciferase release assay.

Authors:  Robin Ketteler; Brian Seed
Journal:  Autophagy       Date:  2008-06-03       Impact factor: 16.016

2.  Ksp1 kinase regulates autophagy via the target of rapamycin complex 1 (TORC1) pathway.

Authors:  Midori Umekawa; Daniel J Klionsky
Journal:  J Biol Chem       Date:  2012-03-23       Impact factor: 5.157

Review 3.  The regulation of filamentous growth in yeast.

Authors:  Paul J Cullen; George F Sprague
Journal:  Genetics       Date:  2012-01       Impact factor: 4.562

4.  Genetic networks inducing invasive growth in Saccharomyces cerevisiae identified through systematic genome-wide overexpression.

Authors:  Christian A Shively; Matthew J Eckwahl; Craig J Dobry; Dattatreya Mellacheruvu; Alexey Nesvizhskii; Anuj Kumar
Journal:  Genetics       Date:  2013-02-14       Impact factor: 4.562

5.  A profile of differentially abundant proteins at the yeast cell periphery during pseudohyphal growth.

Authors:  Tao Xu; Christian A Shively; Rui Jin; Matthew J Eckwahl; Craig J Dobry; Qingxuan Song; Anuj Kumar
Journal:  J Biol Chem       Date:  2010-03-12       Impact factor: 5.157

6.  Regulation of vacuolar H+-ATPase activity by the Cdc42 effector Ste20 in Saccharomyces cerevisiae.

Authors:  Meng Lin; Sheena Claire Li; Patricia M Kane; Thomas Höfken
Journal:  Eukaryot Cell       Date:  2012-02-10

7.  Unconventional genomic architecture in the budding yeast saccharomyces cerevisiae masks the nested antisense gene NAG1.

Authors:  Jun Ma; Craig J Dobry; Damian J Krysan; Anuj Kumar
Journal:  Eukaryot Cell       Date:  2008-02-29

8.  Potassium starvation induces autophagy in yeast.

Authors:  Nambirajan Rangarajan; Ishani Kapoor; Shuang Li; Peter Drossopoulos; Kristen K White; Victoria J Madden; Henrik G Dohlman
Journal:  J Biol Chem       Date:  2020-08-11       Impact factor: 5.157

9.  TEAK: topology enrichment analysis framework for detecting activated biological subpathways.

Authors:  Thair Judeh; Cole Johnson; Anuj Kumar; Dongxiao Zhu
Journal:  Nucleic Acids Res       Date:  2012-12-24       Impact factor: 16.971

10.  Large-Scale Analysis of Kinase Signaling in Yeast Pseudohyphal Development Identifies Regulation of Ribonucleoprotein Granules.

Authors:  Christian A Shively; Hye Kyong Kweon; Kaitlyn L Norman; Dattatreya Mellacheruvu; Tao Xu; Daniel T Sheidy; Craig J Dobry; Ivan Sabath; Eric E P Cosky; Elizabeth J Tran; Alexey Nesvizhskii; Philip C Andrews; Anuj Kumar
Journal:  PLoS Genet       Date:  2015-10-08       Impact factor: 5.917

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