Literature DB >> 17890329

Genomic deletion marking an emerging subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula.

M P Dempsey1, M Dobson, C Zhang, M Zhang, C Lion, C B Gutiérrez-Martín, P C Iwen, P D Fey, M E Olson, D Niemeyer, S Francesconi, R Crawford, M Stanley, J Rhodes, D M Wagner, A J Vogler, D Birdsell, P Keim, A Johansson, S H Hinrichs, A K Benson.   

Abstract

Francisella tularensis subsp. holarctica is widely disseminated in North America and the boreal and temperate regions of the Eurasian continent. Comparative genomic analyses identified a 1.59-kb genomic deletion specific to F. tularensis subsp. holarctica isolates from Spain and France. Phylogenetic analysis of strains carrying this deletion by multiple-locus variable-number tandem repeat analysis showed that the strains comprise a highly related set of genotypes, implying that these strains were recently introduced or recently emerged by clonal expansion in France and the Iberian Peninsula.

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Year:  2007        PMID： 17890329      PMCID： PMC2168206          DOI： 10.1128/AEM.00646-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  25 in total

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3.  Inhibition of Shigella flexneri-induced transepithelial migration of polymorphonuclear leucocytes by cadaverine.

Authors:  B A McCormick; M I Fernandez; A M Siber; A T Maurelli
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4.  Paired-end sequence mapping detects extensive genomic rearrangement and translocation during divergence of Francisella tularensis subsp. tularensis and Francisella tularensis subsp. holarctica populations.

Authors:  Michael P Dempsey; Joseph Nietfeldt; Jacques Ravel; Steven Hinrichs; Robert Crawford; Andrew K Benson
Journal:  J Bacteriol       Date:  2006-08       Impact factor: 3.490

5.  Chromosome rearrangement and diversification of Francisella tularensis revealed by the type B (OSU18) genome sequence.

Authors:  Joseph F Petrosino; Qin Xiang; Sandor E Karpathy; Huaiyang Jiang; Shailaja Yerrapragada; Yamei Liu; Jason Gioia; Lisa Hemphill; Arely Gonzalez; T M Raghavan; Akif Uzman; George E Fox; Sarah Highlander; Mason Reichard; Rebecca J Morton; Kenneth D Clinkenbeard; George M Weinstock
Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

6.  Potential source of Francisella tularensis live vaccine strain attenuation determined by genome comparison.

Authors:  Laurence Rohmer; Mitchell Brittnacher; Kerstin Svensson; Danielle Buckley; Eric Haugen; Yang Zhou; Jean Chang; Ruth Levy; Hillary Hayden; Mats Forsman; Maynard Olson; Anders Johansson; Rajinder Kaul; Samuel I Miller
Journal:  Infect Immun       Date:  2006-09-25       Impact factor: 3.441

7.  Comparison of different PCR approaches for typing of Francisella tularensis strains.

Authors:  V A de la Puente-Redondo; N G del Blanco; C B Gutiérrez-Martín; F J García-Peña; E F Rodríguez Ferri
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

8.  Genome diversity among regional populations of Francisella tularensis subspecies tularensis and Francisella tularensis subspecies holarctica isolated from the US.

Authors:  M M Samrakandi; C Zhang; M Zhang; J Nietfeldt; J Kim; P C Iwen; M E Olson; P D Fey; G E Duhamel; S H Hinrichs; J D Cirillo; A K Benson
Journal:  FEMS Microbiol Lett       Date:  2004-08-01       Impact factor: 2.742

9.  Epidemiologic and molecular analysis of human tularemia, United States, 1964-2004.

Authors:  J Erin Staples; Kristy A Kubota; Linda G Chalcraft; Paul S Mead; Jeannine M Petersen
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10.  Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.

Authors:  Laurence Rohmer; Christine Fong; Simone Abmayr; Michael Wasnick; Theodore J Larson Freeman; Matthew Radey; Tina Guina; Kerstin Svensson; Hillary S Hayden; Michael Jacobs; Larry A Gallagher; Colin Manoil; Robert K Ernst; Becky Drees; Danielle Buckley; Eric Haugen; Donald Bovee; Yang Zhou; Jean Chang; Ruth Levy; Regina Lim; Will Gillett; Don Guenthener; Allison Kang; Scott A Shaffer; Greg Taylor; Jinzhi Chen; Byron Gallis; David A D'Argenio; Mats Forsman; Maynard V Olson; David R Goodlett; Rajinder Kaul; Samuel I Miller; Mitchell J Brittnacher
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583
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  18 in total

1.  Evidence of circulation of an epidemic strain of Francisella tularensis in France by multispacer typing.

Authors:  W Li; D Raoult; J-M Rolain; B La Scola
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2.  Francisella tularensis molecular typing using differential insertion sequence amplification.

Authors:  Marilynn A Larson; Paul D Fey; Amanda M Bartling; Peter C Iwen; Michael P Dempsey; Stephen C Francesconi; Steven H Hinrichs
Journal:  J Clin Microbiol       Date:  2011-05-25       Impact factor: 5.948

3.  Differential chitinase activity and production within Francisella species, subspecies, and subpopulations.

Authors:  Jeffrey C Chandler; Claudia R Molins; Jeannine M Petersen; John T Belisle
Journal:  J Bacteriol       Date:  2011-04-29       Impact factor: 3.490

4.  Complete genome sequence of Francisella tularensis subspecies holarctica FTNF002-00.

Authors:  Ravi D Barabote; Gary Xie; Thomas S Brettin; Steven H Hinrichs; Paul D Fey; Justin J Jay; Jennifer L Engle; Shubhada D Godbole; Jyothi M Noronha; Richard H Scheuermann; Liwei W Zhou; Christine Lion; Michael P Dempsey
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Journal:  J Bacteriol       Date:  2009-02-27       Impact factor: 3.490

6.  Molecular Detection of Persistent Francisella tularensis Subspecies holarctica in Natural Waters.

Authors:  T Broman; J Thelaus; A-C Andersson; S Bäckman; P Wikström; E Larsson; M Granberg; L Karlsson; E Bäck; H Eliasson; R Mattsson; A Sjöstedt; M Forsman
Journal:  Int J Microbiol       Date:  2010-09-08

7.  Rapid high resolution genotyping of Francisella tularensis by whole genome sequence comparison of annotated genes ("MLST+").

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Journal:  PLoS One       Date:  2015-04-09       Impact factor: 3.240

8.  Complete Genome Sequence of a Francisella tularensis subsp. holarctica Strain from Germany Causing Lethal Infection in Common Marmosets.

Authors:  Markus H Antwerpen; E Schacht; P Kaysser; W D Splettstoesser
Journal:  Genome Announc       Date:  2013-02-07

9.  German Francisella tularensis isolates from European brown hares (Lepus europaeus) reveal genetic and phenotypic diversity.

Authors:  Wolfgang Müller; Helmut Hotzel; Peter Otto; Axel Karger; Barbara Bettin; Herbert Bocklisch; Silke Braune; Ulrich Eskens; Stefan Hörmansdorfer; Regina Konrad; Anne Nesseler; Martin Peters; Martin Runge; Gernot Schmoock; Bernd-Andreas Schwarz; Reinhard Sting; Kerstin Myrtennäs; Edvin Karlsson; Mats Forsman; Herbert Tomaso
Journal:  BMC Microbiol       Date:  2013-03-21       Impact factor: 3.605

10.  Identification of Francisella tularensis cluster in central and western Europe.

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