Literature DB >> 17884304

Polyphasic evidence delineating the root of life and roots of biological domains.

J Tze-Fei Wong1, Jianhuan Chen, Wai-Kin Mat, Siu-Kin Ng, Hong Xue.   

Abstract

Twenty different lines of polyphasic evidence obtained from tRNA and protein sequences, anticodon usages, gene contents, metabolism and geochemistry have made possible the identification of a Last Universal Common Ancestor (LUCA) phylogenetically located proximal to the hyperthermophilic methanogenic archaeon Methanopyrus. Combined with analysis of high-similarity cross-domain tRNA pairs, the evidence also suggests a Thermotoga-proximal Last Bacterial Common Ancestor (LBACA) that originated from Crenarchaeota close to Aeropyrum, and a Plasmodium-proximal Last Eukaryotic Common Ancestor (LECA) derived from Ferroplasma through endosymbiosis.

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Year:  2007        PMID: 17884304     DOI: 10.1016/j.gene.2007.07.032

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  19 in total

1.  Unassigned codons, nonsense suppression, and anticodon modifications in the evolution of the genetic code.

Authors:  Peter T S van der Gulik; Wouter D Hoff
Journal:  J Mol Evol       Date:  2011-11-11       Impact factor: 2.395

Review 2.  The falsifiability of the models for the origin of eukaryotes.

Authors:  Matej Vesteg; Juraj Krajčovič
Journal:  Curr Genet       Date:  2011-10-19       Impact factor: 3.886

3.  The evolutionary history of the structure of 5S ribosomal RNA.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2009-07-29       Impact factor: 2.395

4.  The origin of a derived superkingdom: how a gram-positive bacterium crossed the desert to become an archaeon.

Authors:  Ruben E Valas; Philip E Bourne
Journal:  Biol Direct       Date:  2011-02-28       Impact factor: 4.540

5.  A tree of cellular life inferred from a genomic census of molecular functions.

Authors:  Kyung Mo Kim; Arshan Nasir; Kyuin Hwang; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2014-08-17       Impact factor: 2.395

6.  A Proposal of the Ur-proteome.

Authors:  Miryam Palacios-Pérez; Fernando Andrade-Díaz; Marco V José
Journal:  Orig Life Evol Biosph       Date:  2017-11-10       Impact factor: 1.950

7.  The ancient history of the structure of ribonuclease P and the early origins of Archaea.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  BMC Bioinformatics       Date:  2010-03-24       Impact factor: 3.169

8.  Search for primitive Methanopyrus based on genetic distance between Val- and Ile-tRNA synthetases.

Authors:  Zhiliang Yu; Ken Takai; Alexei Slesarev; Hong Xue; J Tze-Fei Wong
Journal:  J Mol Evol       Date:  2009-10-20       Impact factor: 2.395

9.  Hydrothermal focusing of chemical and chemiosmotic energy, supported by delivery of catalytic Fe, Ni, Mo/W, Co, S and Se, forced life to emerge.

Authors:  Wolfgang Nitschke; Michael J Russell
Journal:  J Mol Evol       Date:  2009-11-13       Impact factor: 2.395

10.  Genome networks root the tree of life between prokaryotic domains.

Authors:  Tal Dagan; Mayo Roettger; David Bryant; William Martin
Journal:  Genome Biol Evol       Date:  2010-07-12       Impact factor: 3.416

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