| Literature DB >> 17883857 |
Aurélien Latouche1, Chantal Guihenneuc-Jouyaux, Claire Girard, Denis Hémon.
Abstract
BACKGROUND: In the context of ecological studies, the Bayesian hierarchical Poisson model is of prime interest when studying the association between environmental exposure and rare diseases. However, adding spatially structured extra-variability in the model fitted to the data when such extra-variability does not exist conditionally on the covariates included in the model (over-fitting) may bias the estimation of the ecological association between covariates and relative risks toward the null. In order to investigate that possibility, a simulation study of the impact of introducing unnecessary residual spatial structure in the estimation model was conducted.Entities:
Mesh:
Year: 2007 PMID: 17883857 PMCID: PMC2241594 DOI: 10.1186/1476-072X-6-39
Source DB: PubMed Journal: Int J Health Geogr ISSN: 1476-072X Impact factor: 3.918
Between area variance proportion, p(3), according to ecological link β and
| 2.33 | 23.35 | 46.6 | |
| 0.00 | 0.00 | 0.00 | 0.00 |
| 0.12 | 0.03 | 0.25 | 0.40 |
| 0.21 | 0.09 | 0.50 | 0.67 |
| 0.33 | 0.19 | 0.71 | 0.83 |
(1)β: Ecological link
(2): Harmonic mean of expected disease counts
(3)p = Bv/Var[log()]: Between area variance proportion
(*) : Indicator of p-value < 5% from McNemar's test (1)(2)(3) for comparing proportions 1 - π(0) under M0 and BYM models.
Figure 1Replicates of a gaussian covariate with autocorrelation strenght of ρ= 0.80 (left) and ρ= 0.98 (right) at 100 km, (in quartiles).
Estimation of the ecological link β when = 23.35 and ρ= 0.0, 0.4 (400 replications)
| Model | MB(4) | sd(MB) | sd( | RMSE(6) | 1 - | |||||
| 0.0 | 0.00 | 0.000 | 1.63 | 1.73 | 1.73 | 0.953 | 0.047 | |||
| BYM | 0.000 | 1.76 | 1.74 | 1.73 | 0.958 | 0.042 | ||||
| 0.12 | 0.119 | 1.61 | -0.44 | 0.69 | 1.67 | 1.67 | 0.930 | 1.000 | ||
| BYM | 0.120 | 1.72 | -0.31 | 0.70 | 1.68 | 1.68 | 0.955 | 1.000 | ||
| 0.21 | 0.210 | 1.60 | 0.49 | 0.39 | 1.64 | 1.64 | 0.948 | 1.000 | ||
| BYM | 0.210 | 1.72 | 0.58 | 0.39 | 1.66 | 1.66 | 0.960 | 1.000 | ||
| 0.33 | 0.329 | 1.57 | -0.28 | 0.23 | 1.58 | 1.58 | 0.953 | 1.000 | ||
| BYM | 0.329 | 1.70 | -0.24 | 0.24 | 1.58 | 1.58 | 0.968 | 1.000 | ||
| 0.4 | 0.00 | -0.001 | 1.72 | 1.76 | 1.76 | 0.955 | 0.045* | |||
| BYM | -0.001 | 1.90 | 1.78 | 1.78 | 0.975 | 0.025 | ||||
| 0.12 | 0.121 | 1.73 | 0.79 | 0.73 | 1.75 | 1.75 | 0.945 | 1.000 | ||
| BYM | 0.121 | 1.91 | 0.78 | 0.74 | 1.78 | 1.78 | 0.968 | 1.000 | ||
| 0.21 | 0.211 | 1.72 | 0.41 | 0.39 | 1.66 | 1.66 | 0.958 | 1.000 | ||
| BYM | 0.211 | 1.90 | 0.50 | 0.39 | 1.67 | 1.67 | 0.973 | 1.000 | ||
| 0.33 | 0.332 | 1.70 | 0.71 | 0.25 | 1.68 | 1.69 | 0.945 | 1.000 | ||
| BYM | 0.332 | 1.89 | 0.70 | 0.25 | 1.70 | 1.71 | 0.973 | 1.000 | ||
(1) ρ: autocorrelation at 100 km
(2) : 100 * mean of posterior means
(3) : 100 * mean of posterior standard deviations
(4) MB : 100 * Mean Bias
(5) sd(β) : 100 * standard deviation of posterior means
(6) RMSE : 100 * Root Mean Square Error
(7) π(β) : Coverage proportion β ∈ CI(β)
(8) 1 - π(0) : Non-Coverage proportion 0 ∉ CI(β)
(*) : Indicator of p-value < 5% from McNemar's test (1)(2)(3) for comparing proportions 1 - π(0) under M0 and BYM models.
Estimation of the ecological link β when = 23.35 and ρ= 0.90, 0.95, 0.98
| (1)(2)(3)(4)(5)(6)(7)(8)(*) | ||||||||||
| Model | MB(4) | sd(MB) | sd( | RMSE(6) | 1 - | |||||
| 0.90 | 0.00 | 0.003 | 2.96 | 2.98 | 2.99 | 0.945 | 0.055* | |||
| BYM | 0.003 | 3.39 | 3.03 | 3.04 | 0.970 | 0.030 | ||||
| 0.12 | 0.122 | 2.98 | 2.07 | 1.24 | 2.99 | 3.00 | 0.958 | 0.973* | ||
| BYM | 0.123 | 3.44 | 2.51 | 1.27 | 3.07 | 3.08 | 0.973 | 0.938 | ||
| 0.21 | 0.213 | 2.96 | 1.38 | 0.79 | 3.32 | 3.34 | 0.930 | 0.998 | ||
| BYM | 0.213 | 3.41 | 1.31 | 0.81 | 3.41 | 3.42 | 0.955 | 0.998 | ||
| 0.33 | 0.331 | 2.98 | 0.37 | 0.47 | 3.11 | 3.11 | 0.943 | 1.000 | ||
| BYM | 0.331 | 3.43 | 0.39 | 0.47 | 3.13 | 3.13 | 0.965 | 1.000 | ||
| 0.95 | 0.00 | 0.002 | 4.07 | 4.04 | 4.04 | 0.950 | 0.050* | |||
| BYM | 0.002 | 4.72 | 4.14 | 4.14 | 0.975 | 0.025 | ||||
| 0.12 | 0.121 | 4.05 | 1.03 | 1.82 | 4.38 | 4.37 | 0.945 | 0.843* | ||
| BYM | 0.121 | 4.70 | 1.18 | 1.89 | 4.54 | 4.54 | 0.960 | 0.775 | ||
| 0.21 | 0.208 | 3.99 | -1.07 | 0.99 | 4.18 | 4.18 | 0.960 | 0.988 | ||
| BYM | 0.208 | 4.62 | -0.80 | 1.03 | 4.31 | 4.31 | 0.978 | 0.983 | ||
| 0.33 | 0.333 | 4.16 | 0.78 | 0.66 | 4.33 | 4.33 | 0.963 | 1.000 | ||
| BYM | 0.333 | 4.80 | 0.98 | 0.66 | 4.34 | 4.35 | 0.980 | 1.000 | ||
| 0.98 | 0.00 | 0.002 | 6.29 | 6.48 | 6.48 | 0.950 | 0.050* | |||
| BYM | 0.002 | 7.29 | 6.53 | 6.53 | 0.970 | 0.030 | ||||
| 0.12 | 0.121 | 6.23 | 1.22 | 2.49 | 5.98 | 5.98 | 0.953 | 0.545* | ||
| BYM | 0.122 | 7.20 | 1.26 | 2.47 | 5.99 | 5.98 | 0.975 | 0.420 | ||
| 0.21 | 0.207 | 6.35 | -1.36 | 1.57 | 6.61 | 6.60 | 0.960 | 0.845* | ||
| BYM | 0.207 | 7.35 | -1.39 | 1.59 | 6.67 | 6.67 | 0.985 | 0.782 | ||
| 0.33 | 0.330 | 6.27 | 0.09 | 1.00 | 6.64 | 6.63 | 0.935 | 0.985 | ||
| BYM | 0.331 | 7.28 | 0.24 | 1.01 | 6.69 | 6.68 | 0.975 | 0.978 | ||
(1) ρ: autocorrelation at 100 km
(2) : 100 * mean of posterior means
(3) : 100 * mean of posterior standard deviations
(4) MB : 100 * Mean Bias
(5) sd(β) : 100 * standard deviation of posterior means
(6) RMSE : 100 * Root Mean Square Error
(7) π(β) : Coverage proportion β ∈ CI(β)
(8) 1 - π(0) : Non-Coverage proportion 0 ∉ CI(β)
(*) : Indicator of p-value < 5% from McNemar's test (1)(2)(3) for comparing proportions 1 - π(0) under M0 and BYM models.
Estimation of the ecological link β when = 0.95 while varying
| (1)(2)(3)(4)(5)(6)(7)(8)(*) | ||||||||||
| Model | MB(3) | sd(MB) | sd( | RMSE(5) | 1 - | |||||
| 46.6 | 0.00 | -0.001 | 2.84 | 2.76 | 2.76 | 0.958 | 0.042* | |||
| BYM | -0.001 | 3.40 | 2.85 | 2.85 | 0.975 | 0.025 | ||||
| 0.12 | 0.118 | 2.81 | -1.34 | 1.21 | 2.91 | 2.91 | 0.945 | 0.960* | ||
| BYM | 0.119 | 3.38 | -1.18 | 1.21 | 2.91 | 2.91 | 0.980 | 0.930 | ||
| 0.21 | 0.212 | 2.87 | 0.94 | 0.69 | 2.89 | 2.89 | 0.955 | 1.000 | ||
| BYM | 0.212 | 3.47 | 0.75 | 0.70 | 2.95 | 2.96 | 0.983 | 1.000 | ||
| 0.33 | 0.329 | 2.88 | -0.21 | 0.47 | 3.10 | 3.10 | 0.953 | 1.000 | ||
| BYM | 0.330 | 3.45 | -0.08 | 0.48 | 3.19 | 3.19 | 0.980 | 1.000 | ||
| 23.3 | 0.00 | 0.002 | 4.07 | 4.04 | 4.04 | 0.950 | 0.050* | |||
| BYM | 0.002 | 4.72 | 4.14 | 4.14 | 0.975 | 0.025 | ||||
| 0.12 | 0.121 | 4.05 | 1.03 | 1.82 | 4.38 | 4.37 | 0.945 | 0.843* | ||
| BYM | 0.121 | 4.70 | 1.18 | 1.89 | 4.54 | 4.54 | 0.960 | 0.775 | ||
| 0.21 | 0.208 | 3.99 | -1.07 | 0.99 | 4.18 | 4.18 | 0.960 | 0.988 | ||
| BYM | 0.208 | 4.62 | -0.80 | 1.03 | 4.31 | 4.31 | 0.978 | 0.983 | ||
| 0.33 | 0.333 | 4.16 | 0.78 | 0.66 | 4.33 | 4.34 | 0.963 | 1.000 | ||
| BYM | 0.333 | 4.79 | 0.98 | 0.66 | 4.34 | 4.35 | 0.980 | 1.000 | ||
| 2.33 | 0.00 | 0.007 | 12.4 | 13.5 | 13.4 | 0.935 | 0.065 | |||
| BYM | 0.008 | 13.3 | 13.4 | 13.4 | 0.948 | 0.052 | ||||
| 0.12 | 0.112 | 12.5 | -6.94 | 5.38 | 12.9 | 12.9 | 0.953 | 0.162* | ||
| BYM | 0.113 | 13.4 | -5.65 | 5.43 | 13.0 | 13.0 | 0.965 | 0.130 | ||
| 0.21 | 0.206 | 12.8 | -1.92 | 3.45 | 14.5 | 14.5 | 0.927 | 0.410* | ||
| BYM | 0.206 | 13.8 | -1.98 | 3.46 | 14.6 | 14.5 | 0.940 | 0.368 | ||
| 0.33 | 0.341 | 13.0 | 3.38 | 2.12 | 14.00 | 14.0 | 0.938 | 0.738* | ||
| BYM | 0.343 | 13.9 | 4.05 | 2.14 | 14.1 | 14.2 | 0.960 | 0.715 | ||
(1): 100 * mean of posterior means
(2) : 100 * mean of posterior standard deviations
(3) MB : 100 * Mean Bias
(4) sd(β) : 100 * standard deviation of posterior means
(5) RMSE : 100 * Root Mean Square Error
(6)π(β) : Coverage proportion β ∈ CI(β)
(7) 1 - π(0) : Non-Coverage proportion 0 ∉ CI(β)
(*) : Indicator of p-value < 5% from McNemar's test for comparing proportions 1 - π(0) under M0 and BYM models.