Literature DB >> 17883312

PulseNet USA standardized pulsed-field gel electrophoresis protocol for subtyping of Vibrio parahaemolyticus.

M B Parsons1, K L F Cooper, K A Kubota, N Puhr, S Simington, P S Calimlim, D Schoonmaker-Bopp, C Bopp, B Swaminathan, P Gerner-Smidt, E M Ribot.   

Abstract

PulseNet is a national molecular subtyping network for foodborne disease surveillance composed of public health and food regulatory agencies. Participants employ molecular subtyping of foodborne pathogens using a standardized method of pulsed-field gel electrophoresis (PFGE) for conducting laboratory-based surveillance of foodborne pathogens. The PulseNet standardized PFGE protocols are developed through a comprehensive testing process. The reproducibility of the protocol undergoes an internal evaluation at the Centers for Disease Control and Prevention and an external evaluation in multiple PulseNet laboratories. Here we describe the development and evaluation of a rapid PFGE protocol for subtyping Vibrio parahaemolyticus for use in PulseNet activities. The protocol was derived from the existing standardized PulseNet protocols for Escherichia coli O157:H7 and Vibrio cholerae. An external evaluation of this protocol was undertaken in collaboration with three PulseNet USA participating public health laboratories. Comparative analysis of the PFGE fingerprints generated by each of these laboratories demonstrated that the protocol is both reliable and reproducible in the hands of multiple users.

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Year:  2007        PMID: 17883312     DOI: 10.1089/fpd.2007.0089

Source DB:  PubMed          Journal:  Foodborne Pathog Dis        ISSN: 1535-3141            Impact factor:   3.171


  14 in total

1.  Genetic characterization of Escherichia coli O104 isolates from different sources in the United States.

Authors:  Lydia V Rump; Sonya Bodeis-Jones; Jason Abbott; Shaohua Zhao; Julie Kase; Sandra Lorenz; Markus Fischer; Eric Brown; Jianghong Meng
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

2.  Risk Factors for Vibrio parahaemolyticus Infection in a Southern Coastal Region of China.

Authors:  Yuxue Liao; Yinghui Li; Shuyu Wu; Jin Mou; Zengkang Xu; Rilin Cui; John D Klena; Xiaolu Shi; Yan Lu; Yaqun Qiu; Yiman Lin; Xu Xie; Hanwu Ma; Zhongjie Li; Hongjie Yu; Jay K Varma; Lu Ran; Qinghua Hu; Jinquan Cheng
Journal:  Foodborne Pathog Dis       Date:  2015-08-19       Impact factor: 3.171

3.  Evaluation and validation of a PulseNet standardized pulsed-field gel electrophoresis protocol for subtyping Vibrio parahaemolyticus: an international multicenter collaborative study.

Authors:  Kai Man Kam; Cindy K Y Luey; Michele B Parsons; Kara L F Cooper; G B Nair; M Alam; M Atiqul Islam; Danny T L Cheung; Y W Chu; T Ramamurthy; G P Pazhani; S K Bhattacharya; H Watanabe; J Terajima; E Arakawa; O-A Ratchtrachenchai; S Huttayananont; Efrain M Ribot; Peter Gerner-Smidt; Bala Swaminathan
Journal:  J Clin Microbiol       Date:  2008-06-25       Impact factor: 5.948

4.  Vibrio parahaemolyticus and Vibrio vulnificus Recovered from Oysters during an Oyster Relay Study.

Authors:  Sara Elmahdi; Salina Parveen; Sylvia Ossai; Ligia V DaSilva; Michael Jahncke; John Bowers; John Jacobs
Journal:  Appl Environ Microbiol       Date:  2018-01-17       Impact factor: 4.792

5.  Impact of compounding error on strategies for subtyping pathogenic bacteria.

Authors:  Douglas R Call; Lisa Orfe; Margaret A Davis; Stacey Lafrentz; Min-Su Kang
Journal:  Foodborne Pathog Dis       Date:  2008-08       Impact factor: 3.171

6.  Rapid identification of Vibrio parahaemolyticus by whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Tracy H Hazen; Robert J Martinez; Yanfeng Chen; Patricia C Lafon; Nancy M Garrett; Michele B Parsons; Cheryl A Bopp; M Cameron Sullards; Patricia A Sobecky
Journal:  Appl Environ Microbiol       Date:  2009-09-11       Impact factor: 4.792

7.  Characterization of Vibrio parahaemolyticus clinical strains from Maryland (2012-2013) and comparisons to a locally and globally diverse V. parahaemolyticus strains by whole-genome sequence analysis.

Authors:  Julie Haendiges; Ruth Timme; Marc W Allard; Robert A Myers; Eric W Brown; Narjol Gonzalez-Escalona
Journal:  Front Microbiol       Date:  2015-02-19       Impact factor: 5.640

8.  Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics.

Authors:  Tracy H Hazen; Patricia C Lafon; Nancy M Garrett; Tiffany M Lowe; Daniel J Silberger; Lori A Rowe; Michael Frace; Michele B Parsons; Cheryl A Bopp; David A Rasko; Patricia A Sobecky
Journal:  Front Microbiol       Date:  2015-03-24       Impact factor: 5.640

9.  Antimicrobial and Genetic Profiles of Vibrio vulnificus and Vibrio parahaemolyticus Isolated From the Maryland Coastal Bays, United States.

Authors:  Ligia V da Silva; Sylvia Ossai; Paulinus Chigbu; Salina Parveen
Journal:  Front Microbiol       Date:  2021-05-21       Impact factor: 5.640

10.  Synergistic effect of various virulence factors leading to high toxicity of environmental V. cholerae non-O1/ non-O139 isolates lacking ctx gene : comparative study with clinical strains.

Authors:  Neha Rajpara; Kittappa Vinothkumar; Priyabrata Mohanty; Arun Kumar Singh; Rajesh Singh; Ritam Sinha; Dhrubajyoti Nag; Hemanta Koley; Ashima Kushwaha Bhardwaj
Journal:  PLoS One       Date:  2013-09-23       Impact factor: 3.240

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