Literature DB >> 17870468

Versatility in ligand recognition by LDL receptor family proteins: advances and frontiers.

Stephen C Blacklow1.   

Abstract

Proteins of the low-density lipoprotein receptor family transport cholesterol-carrying particles into cells, clear protease-inhibitor complexes from the circulation, participate in biological signaling cascades, and even serve as viral receptors. These receptors utilize clusters of cysteine-rich LDL receptor type-A (LA) modules to bind many of their ligands. Recent structures show that these modules typically exhibit a characteristic binding mode to recognize their partners, relying primarily on electrostatic complementarity and avidity effects. The dominant contribution of electrostatic interactions with small interface areas in these complexes allows binding to be regulated by changes in pH via at least two distinct mechanisms. The structure of the subtilisin/kexin family protease PCSK9, a newly identified molecular partner of the LDLR also implicated in LDL-cholesterol homeostasis, also raises the possibility that the LDLR and its related family members may employ other strategies for pH-sensitive binding that have yet to be uncovered.

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Year:  2007        PMID: 17870468      PMCID: PMC2766800          DOI: 10.1016/j.sbi.2007.08.017

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  35 in total

1.  Structure of the LDL receptor extracellular domain at endosomal pH.

Authors:  Gabby Rudenko; Lisa Henry; Keith Henderson; Konstantin Ichtchenko; Michael S Brown; Joseph L Goldstein; Johann Deisenhofer
Journal:  Science       Date:  2002-11-29       Impact factor: 47.728

2.  Catching the common cold.

Authors:  Stephen C Blacklow
Journal:  Nat Struct Mol Biol       Date:  2004-05       Impact factor: 15.369

3.  X-ray structure of a minor group human rhinovirus bound to a fragment of its cellular receptor protein.

Authors:  Nuria Verdaguer; Ignacio Fita; Manuela Reithmayer; Rosita Moser; Dieter Blaas
Journal:  Nat Struct Mol Biol       Date:  2004-04-04       Impact factor: 15.369

4.  Effect of arginine 172 on the binding of apolipoprotein E to the low density lipoprotein receptor.

Authors:  J A Morrow; K S Arnold; J Dong; M E Balestra; T L Innerarity; K H Weisgraber
Journal:  J Biol Chem       Date:  2000-01-28       Impact factor: 5.157

5.  Conformational flexibility in the apolipoprotein E amino-terminal domain structure determined from three new crystal forms: implications for lipid binding.

Authors:  B W Segelke; M Forstner; M Knapp; S D Trakhanov; S Parkin; Y M Newhouse; H D Bellamy; K H Weisgraber; B Rupp
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

6.  The lipid-associated conformation of the low density lipoprotein receptor binding domain of human apolipoprotein E.

Authors:  C A Fisher; V Narayanaswami; R O Ryan
Journal:  J Biol Chem       Date:  2000-10-27       Impact factor: 5.157

7.  Apolipoprotein E;-low density lipoprotein receptor interaction. Influences of basic residue and amphipathic alpha-helix organization in the ligand.

Authors:  M Zaiou; K S Arnold; Y M Newhouse; T L Innerarity; K H Weisgraber; M L Segall; M C Phillips; S Lund-Katz
Journal:  J Lipid Res       Date:  2000-07       Impact factor: 5.922

8.  Mutations in PCSK9 cause autosomal dominant hypercholesterolemia.

Authors:  Marianne Abifadel; Mathilde Varret; Jean-Pierre Rabès; Delphine Allard; Khadija Ouguerram; Martine Devillers; Corinne Cruaud; Suzanne Benjannet; Louise Wickham; Danièle Erlich; Aurélie Derré; Ludovic Villéger; Michel Farnier; Isabel Beucler; Eric Bruckert; Jean Chambaz; Bernard Chanu; Jean-Michel Lecerf; Gerald Luc; Philippe Moulin; Jean Weissenbach; Annick Prat; Michel Krempf; Claudine Junien; Nabil G Seidah; Catherine Boileau
Journal:  Nat Genet       Date:  2003-06       Impact factor: 38.330

9.  The secretory proprotein convertase neural apoptosis-regulated convertase 1 (NARC-1): liver regeneration and neuronal differentiation.

Authors:  Nabil G Seidah; Suzanne Benjannet; Louise Wickham; Jadwiga Marcinkiewicz; Stephanie Belanger Jasmin; Stefano Stifani; Ajoy Basak; Annik Prat; Michel Chretien
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

10.  A two-module region of the low-density lipoprotein receptor sufficient for formation of complexes with apolipoprotein E ligands.

Authors:  Carl Fisher; Dunia Abdul-Aziz; Stephen C Blacklow
Journal:  Biochemistry       Date:  2004-02-03       Impact factor: 3.162

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  29 in total

1.  Initiating protease with modular domains interacts with β-glucan recognition protein to trigger innate immune response in insects.

Authors:  Daisuke Takahashi; Brandon L Garcia; Michael R Kanost
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

Review 2.  The PCSK9 decade.

Authors:  Gilles Lambert; Barbara Sjouke; Benjamin Choque; John J P Kastelein; G Kees Hovingh
Journal:  J Lipid Res       Date:  2012-07-17       Impact factor: 5.922

3.  Structural basis for receptor recognition of vitamin-B(12)-intrinsic factor complexes.

Authors:  Christian Brix Folsted Andersen; Mette Madsen; Tina Storm; Søren K Moestrup; Gregers R Andersen
Journal:  Nature       Date:  2010-03-18       Impact factor: 49.962

4.  Apolipoprotein E4 effects in Alzheimer's disease are mediated by synaptotoxic oligomeric amyloid-β.

Authors:  Robert M Koffie; Tadafumi Hashimoto; Hwan-Ching Tai; Kevin R Kay; Alberto Serrano-Pozo; Daniel Joyner; Steven Hou; Katherine J Kopeikina; Matthew P Frosch; Virginia M Lee; David M Holtzman; Bradley T Hyman; Tara L Spires-Jones
Journal:  Brain       Date:  2012-05-26       Impact factor: 13.501

5.  Structure of the minimal interface between ApoE and LRP.

Authors:  Miklos Guttman; J Helena Prieto; Tracy M Handel; Peter J Domaille; Elizabeth A Komives
Journal:  J Mol Biol       Date:  2010-03-19       Impact factor: 5.469

6.  Up-regulation of ATP binding cassette transporter A1 expression by very low density lipoprotein receptor and apolipoprotein E receptor 2.

Authors:  Xinping Chen; Zhongmao Guo; Emmanuel U Okoro; Hongfeng Zhang; LiChun Zhou; Xinhua Lin; Allman T Rollins; Hong Yang
Journal:  J Biol Chem       Date:  2011-12-14       Impact factor: 5.157

7.  Acrolein modification impairs key functional features of rat apolipoprotein E: identification of modified sites by mass spectrometry.

Authors:  Tuyen N Tran; Malathi G Kosaraju; Shiori Tamamizu-Kato; Olayemi Akintunde; Ying Zheng; John K Bielicki; Kent Pinkerton; Koji Uchida; Yuan Yu Lee; Vasanthy Narayanaswami
Journal:  Biochemistry       Date:  2014-01-08       Impact factor: 3.162

8.  Site-specific O-glycosylation of members of the low-density lipoprotein receptor superfamily enhances ligand interactions.

Authors:  Shengjun Wang; Yang Mao; Yoshiki Narimatsu; Zilu Ye; Weihua Tian; Christoffer K Goth; Erandi Lira-Navarrete; Nis B Pedersen; Asier Benito-Vicente; Cesar Martin; Kepa B Uribe; Ramon Hurtado-Guerrero; Christina Christoffersen; Nabil G Seidah; Rikke Nielsen; Erik I Christensen; Lars Hansen; Eric P Bennett; Sergey Y Vakhrushev; Katrine T Schjoldager; Henrik Clausen
Journal:  J Biol Chem       Date:  2018-03-20       Impact factor: 5.157

9.  Molecular studies of pH-dependent ligand interactions with the low-density lipoprotein receptor.

Authors:  Taichi Yamamoto; Hsuan-Chih Chen; Emmanuel Guigard; Cyril M Kay; Robert O Ryan
Journal:  Biochemistry       Date:  2008-10-11       Impact factor: 3.162

Review 10.  The role of apolipoprotein E in Alzheimer's disease.

Authors:  Jungsu Kim; Jacob M Basak; David M Holtzman
Journal:  Neuron       Date:  2009-08-13       Impact factor: 17.173

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