Literature DB >> 17868389

The role of common genetic risk variants in Parkinson disease.

E-K Tan1.   

Abstract

Despite the discovery of at least five pathogenic genes in Parkinson disease (PD), the genetic etiology in the vast majority of PD remains to be clarified. Common genetic variants could act as susceptibility risk factors. Our previous meta-analysis of PD genetic association studies, over a 30-year period yielded four genes (N-acetylcysteine 2, monoamine oxidase B, glutathione transferase, and mitochondrial tRNA), as their common variants were found to be associated with PD. More recently, international collaborative studies and meta-analysis have identified the S18Y variant of ubiquitin carboxy-terminal hydrolase L1, Rep 1 variant of alpha-synuclein and tau H1 haplotype to be genetic susceptibility risk/protective factors. However, the most significant, common genetic risk factor in PD has been its association with the leucine-rich repeat kinase-2 (LRRK2) G2385R variant. We conducted an analysis of independent studies involving 2205 PD and 1817 controls and found the average carrier rate of G2385R variant to be about 9% in PD and 4% in controls (p < 0.001; odds ratio: 2.27; 95% confidence interval: 1.78-2.9). A higher frequency of G2385R carriers has been observed in familial PD when compared with sporadic patients. Based on current evidence, certain common genetic variants are likely to modulate the risk of PD.

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Year:  2007        PMID: 17868389     DOI: 10.1111/j.1399-0004.2007.00890.x

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  14 in total

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3.  Beyond the HapMap Genotypic Data: Prospects of Deep Resequencing Projects.

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4.  Analysis of GWAS-linked loci in Parkinson disease reaffirms PARK16 as a susceptibility locus.

Authors:  E-K Tan; H-H Kwok; H-K Kwok; L C Tan; W-T Zhao; K M Prakash; W-L Au; R Pavanni; Y-Y Ng; W Satake; Y Zhao; T Toda; J-J Liu
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5.  Unravelling the role of defective genes.

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8.  Deletion of the WD40 domain of LRRK2 in Zebrafish causes Parkinsonism-like loss of neurons and locomotive defect.

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9.  Epidemiological, clinical, and molecular study of a cohort of Italian Parkinson disease patients: association with glutathione-S-transferase and DNA repair gene polymorphisms.

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Journal:  Cell Mol Neurobiol       Date:  2013-04-04       Impact factor: 5.046

10.  Single-cell expression profiling of dopaminergic neurons combined with association analysis identifies pyridoxal kinase as Parkinson's disease gene.

Authors:  Matthias Elstner; Christopher M Morris; Katharina Heim; Peter Lichtner; Andreas Bender; Divya Mehta; Claudia Schulte; Manu Sharma; Gavin Hudson; Stefano Goldwurm; Alessandro Giovanetti; Massimo Zeviani; David J Burn; Ian G McKeith; Robert H Perry; E Jaros; Rejko Krüger; H-Erich Wichmann; Stefan Schreiber; Harry Campbell; James F Wilson; Alan F Wright; Malcolm Dunlop; Giorgio Pistis; Daniela Toniolo; Patrick F Chinnery; Thomas Gasser; Thomas Klopstock; Thomas Meitinger; Holger Prokisch; Douglass M Turnbull
Journal:  Ann Neurol       Date:  2009-12       Impact factor: 10.422

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