Literature DB >> 17855430

Cis-regulatory analysis of nodal and maternal control of dorsal-ventral axis formation by Univin, a TGF-beta related to Vg1.

Ryan Range1, François Lapraz, Magali Quirin, Sophie Marro, Lydia Besnardeau, Thierry Lepage.   

Abstract

The TGF-beta family member Nodal is essential for specification of the dorsal-ventral axis of the sea urchin embryo, but the molecular factors regulating its expression are not known. Analysis of the nodal promoter is an excellent entry point to identify these factors and to dissect the regulatory logic driving dorsal-ventral axis specification. Using phylogenetic footprinting, we delineated two regulatory regions located in the 5' region of the nodal promoter and in the intron that are required for correct spatial expression and for autoregulation. The 5' regulatory region contains essential binding sites for homeodomain, bZIP, Oct, Tcf/Lef, Sox and Smad transcription factors, and a binding site for an unidentified spatial repressor possibly related to Myb. Soon after its initiation, nodal expression critically requires autoregulation by Nodal and signaling by the maternal TGF-beta Univin. We show that Univin is related to Vg1, that both Nodal and Univin signal through Alk4/5/7, and that zygotic expression of univin, like that of nodal, is dependent on SoxB1 function and Tcf/beta-catenin signaling. This work shows that Tcf, SoxB1 and Univin play essential roles in the regulation of nodal expression in the sea urchin and suggests that some of the regulatory interactions controlling nodal expression predate the chordates. The data are consistent with a model of nodal regulation in which a maternal TGF-beta acts in synergy with maternal transcription factors and with spatial repressors to establish the dorsal-ventral axis of the sea urchin embryo.

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Year:  2007        PMID: 17855430     DOI: 10.1242/dev.007799

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  47 in total

1.  CREBZF, a novel Smad8-binding protein.

Authors:  Jae-Ho Lee; Geun Taek Lee; Seok Joo Kwon; Jeongyun Jeong; Yun-Sok Ha; Wun-Jae Kim; Isaac Yi Kim
Journal:  Mol Cell Biochem       Date:  2012-06-16       Impact factor: 3.396

2.  Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo.

Authors:  Enhu Li; Stefan C Materna; Eric H Davidson
Journal:  Dev Biol       Date:  2012-07-06       Impact factor: 3.582

3.  Functional cis-regulatory genomics for systems biology.

Authors:  Jongmin Nam; Ping Dong; Ryan Tarpine; Sorin Istrail; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

Review 4.  The evolution of nervous system patterning: insights from sea urchin development.

Authors:  Lynne M Angerer; Shunsuke Yaguchi; Robert C Angerer; Robert D Burke
Journal:  Development       Date:  2011-09       Impact factor: 6.868

Review 5.  Evolutionary crossroads in developmental biology: sea urchins.

Authors:  David R McClay
Journal:  Development       Date:  2011-07       Impact factor: 6.868

6.  Neurogenesis in the sea urchin embryo is initiated uniquely in three domains.

Authors:  David R McClay; Esther Miranda; Stacy L Feinberg
Journal:  Development       Date:  2018-11-09       Impact factor: 6.868

7.  Specification to biomineralization: following a single cell type as it constructs a skeleton.

Authors:  Deirdre C Lyons; Megan L Martik; Lindsay R Saunders; David R McClay
Journal:  Integr Comp Biol       Date:  2014-07-09       Impact factor: 3.326

8.  Encoding regulatory state boundaries in the pregastrular oral ectoderm of the sea urchin embryo.

Authors:  Enhu Li; Miao Cui; Isabelle S Peter; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-20       Impact factor: 11.205

Review 9.  Modularity and design principles in the sea urchin embryo gene regulatory network.

Authors:  Isabelle S Peter; Eric H Davidson
Journal:  FEBS Lett       Date:  2009-12-17       Impact factor: 4.124

10.  Patterning of the dorsal-ventral axis in echinoderms: insights into the evolution of the BMP-chordin signaling network.

Authors:  François Lapraz; Lydia Besnardeau; Thierry Lepage
Journal:  PLoS Biol       Date:  2009-11-24       Impact factor: 8.029

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