Literature DB >> 17850599

Genetic diversity of Tunisian figs (Ficus carica L.) as revealed by nuclear microsatellites.

O Saddoud1, K Chatti, A Salhi-Hannachi, M Mars, A Rhouma, M Marrakchi, M Trifi.   

Abstract

The present study portrays the achievement of the genetic polymorphism surveying and the establishment of an ecotypes identification key on the basis of simple sequence repeats data. Seventy-two Tunisian fig ecotypes in situ and ex situ conserved were analyzed using six microsatellite loci. A total of 58 alleles and 124 genotypes were revealed and permitted to evidence high degree of genetic diversity mainly explained at the intra group level. Cluster analysis based on genetic distances proved that a typical continuous genetic diversity characterizes the local germplasm. In addition, the microsatellite multilocus genotyping has permitted to unambiguously distinguish 70 well-defined ecotypes (resolving power of 97.22%). Data are discussed in relation with the reliability of the used markers to check the conformity of the plant material and to rationally manage the conservation of this crop.

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Year:  2007        PMID: 17850599     DOI: 10.1111/j.2007.0018-0661.01967.x

Source DB:  PubMed          Journal:  Hereditas        ISSN: 0018-0661            Impact factor:   3.271


  5 in total

1.  Elucidating genetic relationships, diversity and population structure among the Turkish female figs.

Authors:  Hatice Ikten; Nedim Mutlu; Osman Gulsen; Hilmi Kocatas; Uygun Aksoy
Journal:  Genetica       Date:  2009-08-27       Impact factor: 1.082

2.  Assessment of genetic diversity of thirty Tunisian fig (Ficus carica L.) accessions using pomological traits and SSR markers.

Authors:  Awatef Essid; Fateh Aljane; Mohamed Hichem Neily; Ali Ferchichi; José Ignacio Hormaza
Journal:  Mol Biol Rep       Date:  2021-01-03       Impact factor: 2.316

3.  Identifying the geographical origin of protected sea cucumbers (Apostichopus japonicus) in China using random amplified polymorphic DNA polymerase chain reaction (RAPD-PCR).

Authors:  Zhenyu Yun; Zhao Sun; Haiyan Xu; Zhihong Sun; Yao Zhang; Zhen Liu
Journal:  Food Sci Biotechnol       Date:  2017-04-30       Impact factor: 2.391

4.  SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.

Authors:  Hilal Betul Kaya; Oznur Cetin; Hulya Kaya; Mustafa Sahin; Filiz Sefer; Abdullah Kahraman; Bahattin Tanyolac
Journal:  PLoS One       Date:  2013-09-13       Impact factor: 3.240

5.  Dioecy, more than monoecy, affects plant spatial genetic structure: the case study of Ficus.

Authors:  Alison G Nazareno; Ana L Alzate-Marin; Rodrigo Augusto S Pereira
Journal:  Ecol Evol       Date:  2013-08-28       Impact factor: 2.912

  5 in total

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