Literature DB >> 17850069

Cation-pi interactions of bare and coordinatively saturated metal ions: contrasting structural and energetic characteristics.

A Srinivas Reddy1, Hendrik Zipse, G Narahari Sastry.   

Abstract

In the present work, we address an apparent disparity in the structural parameters of the X-ray structures and theoretical models of cation-pi complexes in biological and chemical recognition. Hydrated metal ion (Li+, Na+, K+, Mg2+, Ca2+) complexes with benzene (cation-pi) are considered as model systems to perform quantum mechanical calculations in evaluating the geometrical parameters and interaction energies of these complexes. The computations disclose that there is a variation in the structural parameters as well as in the interaction energies of these complexes with the multiple additions of water molecules. The distance between the cation and the pi-system increases with the addition of water molecules, delineating the influence of solvent or the neighborhood atoms on the structural parameters of cation-pi systems present in crystal structures.

Entities:  

Year:  2007        PMID: 17850069     DOI: 10.1021/jp075768l

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  Effect of alkyl substitution on H-bond strength of substituted amide-alcohol complexes.

Authors:  M Nagaraju; G Narahari Sastry
Journal:  J Mol Model       Date:  2010-11-16       Impact factor: 1.810

2.  Effect of stepwise microhydration on the methylammonium···phenol and ammonium···phenol interaction.

Authors:  Ana A Rodríguez-Sanz; J Carrazana-García; Enrique M Cabaleiro-Lago; Jesús Rodríguez-Otero
Journal:  J Mol Model       Date:  2012-09-08       Impact factor: 1.810

3.  Effect of stepwise microhydration on the guanidinium···π interaction.

Authors:  Ana A Rodríguez-Sanz; Enrique M Cabaleiro-Lago; Jesús Rodríguez-Otero
Journal:  J Mol Model       Date:  2014-04-02       Impact factor: 1.810

4.  Comparative Analysis of Sulfonium-π, Ammonium-π, and Sulfur-π Interactions and Relevance to SAM-Dependent Methyltransferases.

Authors:  Katherine I Albanese; Andrew Leaver-Fay; Joseph W Treacy; Rodney Park; K N Houk; Brian Kuhlman; Marcey L Waters
Journal:  J Am Chem Soc       Date:  2022-02-02       Impact factor: 15.419

5.  The multiple roles of histidine in protein interactions.

Authors:  Si-Ming Liao; Qi-Shi Du; Jian-Zong Meng; Zong-Wen Pang; Ri-Bo Huang
Journal:  Chem Cent J       Date:  2013-03-01       Impact factor: 4.215

6.  Cations form sequence selective motifs within DNA grooves via a combination of cation-pi and ion-dipole/hydrogen bond interactions.

Authors:  Mikaela Stewart; Tori Dunlap; Elizabeth Dourlain; Bryce Grant; Lori McFail-Isom
Journal:  PLoS One       Date:  2013-08-06       Impact factor: 3.240

  6 in total

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