Literature DB >> 17848528

Generalization of distance to higher dimensional objects.

Steven S Plotkin1.   

Abstract

The measurement of distance between two objects is generalized to the case where the objects are no longer points but are one-dimensional. Additional concepts such as nonextensibility, curvature constraints, and noncrossing become central to the notion of distance. Analytical and numerical results are given for some specific examples, and applications to biopolymers are discussed.

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Year:  2007        PMID: 17848528      PMCID: PMC1986585          DOI: 10.1073/pnas.0607833104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  Protein folding funnels: a kinetic approach to the sequence-structure relationship.

Authors:  P E Leopold; M Montal; J N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-15       Impact factor: 11.205

2.  P versus Q: structural reaction coordinates capture protein folding on smooth landscapes.

Authors:  Samuel S Cho; Yaakov Levy; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

3.  A surface of minimum area metric for the structural comparison of proteins.

Authors:  A Falicov; F E Cohen
Journal:  J Mol Biol       Date:  1996-05-24       Impact factor: 5.469

4.  Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties.

Authors:  T Veitshans; D Klimov; D Thirumalai
Journal:  Fold Des       Date:  1997
  4 in total
  3 in total

1.  Minimal folding pathways for coarse-grained biopolymer fragments.

Authors:  Ali R Mohazab; Steven S Plotkin
Journal:  Biophys J       Date:  2008-09-26       Impact factor: 4.033

2.  Minimum action principle and shape dynamics.

Authors:  Patrice Koehl
Journal:  J R Soc Interface       Date:  2017-05       Impact factor: 4.118

3.  Polymer uncrossing and knotting in protein folding, and their role in minimal folding pathways.

Authors:  Ali R Mohazab; Steven S Plotkin
Journal:  PLoS One       Date:  2013-01-24       Impact factor: 3.240

  3 in total

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