Literature DB >> 17848511

DNA evidence for historic population size and past ecosystem impacts of gray whales.

S Elizabeth Alter1, Eric Rynes, Stephen R Palumbi.   

Abstract

Ecosystem restoration may require returning threatened populations of ecologically pivotal species to near their former abundances, but it is often difficult to estimate historic population size of species that have been heavily exploited. Eastern Pacific gray whales play a key ecological role in their Arctic feeding grounds and are widely thought to have returned to their prewhaling abundance. Recent mortality spikes might signal that the population has reached long-term carrying capacity, but an alternative is that this decline was due to shifting climatic conditions on Arctic feeding grounds. We used a genetic approach to estimate prewhaling abundance of gray whales and report DNA variability at 10 loci that is typical of a population of approximately 76,000-118,000 individuals, approximately three to five times more numerous than today's average census size of 22,000. Coalescent simulations indicate these estimates may include the entire Pacific metapopulation, suggesting that our average measurement of approximately 96,000 individuals was probably distributed between the eastern and currently endangered western Pacific populations. These levels of genetic variation suggest the eastern population is at most at 28-56% of its historical abundance and should be considered depleted. If used to inform management, this would halve acceptable human-caused mortality for this population from 417 to 208 per year. Potentially profound ecosystem impacts may have resulted from a decline from 96,000 gray whales to the current population. At previous levels, gray whales may have seasonally resuspended 700 million cubic meters of sediment, as much as 12 Yukon Rivers, and provided food to a million sea birds.

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Year:  2007        PMID: 17848511      PMCID: PMC1975855          DOI: 10.1073/pnas.0706056104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

Review 2.  Historical overfishing and the recent collapse of coastal ecosystems.

Authors:  J B Jackson; M X Kirby; W H Berger; K A Bjorndal; L W Botsford; B J Bourque; R H Bradbury; R Cooke; J Erlandson; J A Estes; T P Hughes; S Kidwell; C B Lange; H S Lenihan; J M Pandolfi; C H Peterson; R S Steneck; M J Tegner; R R Warner
Journal:  Science       Date:  2001-07-27       Impact factor: 47.728

3.  Sequential megafaunal collapse in the North Pacific Ocean: an ongoing legacy of industrial whaling?

Authors:  A M Springer; J A Estes; G B van Vliet; T M Williams; D F Doak; E M Danner; K A Forney; B Pfister
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-02       Impact factor: 11.205

4.  Rapid worldwide depletion of predatory fish communities.

Authors:  Ransom A Myers; Boris Worm
Journal:  Nature       Date:  2003-05-15       Impact factor: 49.962

5.  Whales before whaling in the North Atlantic.

Authors:  Joe Roman; Stephen R Palumbi
Journal:  Science       Date:  2003-07-25       Impact factor: 47.728

6.  Bayesian coalescent inference of past population dynamics from molecular sequences.

Authors:  A J Drummond; A Rambaut; B Shapiro; O G Pybus
Journal:  Mol Biol Evol       Date:  2005-02-09       Impact factor: 16.240

7.  Mitochondrial phylogenetics and evolution of mysticete whales.

Authors:  Takeshi Sasaki; Masato Nikaido; Healy Hamilton; Mutsuo Goto; Hidehiro Kato; Naohisa Kanda; Luis Pastene; Ying Cao; R Fordyce; Masami Hasegawa; Norihiro Okada
Journal:  Syst Biol       Date:  2005-02       Impact factor: 15.683

8.  Isolation by Distance.

Authors:  S Wright
Journal:  Genetics       Date:  1943-03       Impact factor: 4.562

9.  Divergence population genetics of chimpanzees.

Authors:  Yong-Jin Won; Jody Hey
Journal:  Mol Biol Evol       Date:  2004-10-13       Impact factor: 16.240

10.  A major ecosystem shift in the northern Bering Sea.

Authors:  Jacqueline M Grebmeier; James E Overland; Sue E Moore; Ed V Farley; Eddy C Carmack; Lee W Cooper; Karen E Frey; John H Helle; Fiona A McLaughlin; S Lyn McNutt
Journal:  Science       Date:  2006-03-10       Impact factor: 47.728

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  39 in total

1.  The future of the oceans past.

Authors:  Jeremy B C Jackson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-11-27       Impact factor: 6.237

2.  Pseudogenization of the tooth gene enamelysin (MMP20) in the common ancestor of extant baleen whales.

Authors:  Robert W Meredith; John Gatesy; Joyce Cheng; Mark S Springer
Journal:  Proc Biol Sci       Date:  2010-09-22       Impact factor: 5.349

3.  Drivers and hotspots of extinction risk in marine mammals.

Authors:  Ana D Davidson; Alison G Boyer; Hwahwan Kim; Sandra Pompa-Mansilla; Marcus J Hamilton; Daniel P Costa; Gerardo Ceballos; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

4.  Pre-whaling genetic diversity and population ecology in eastern Pacific gray whales: insights from ancient DNA and stable isotopes.

Authors:  S Elizabeth Alter; Seth D Newsome; Stephen R Palumbi
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

5.  Could genetic diversity in eastern North Pacific gray whales reflect global historic abundance?

Authors:  Per J Palsbøll; Martine Bérubé; Finn Larsen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-18       Impact factor: 11.205

Review 6.  Fundamental concepts in genetics: effective population size and patterns of molecular evolution and variation.

Authors:  Brian Charlesworth
Journal:  Nat Rev Genet       Date:  2009-03       Impact factor: 53.242

7.  Global diversity and oceanic divergence of humpback whales (Megaptera novaeangliae).

Authors:  Jennifer A Jackson; Debbie J Steel; P Beerli; Bradley C Congdon; Carlos Olavarría; Matthew S Leslie; Cristina Pomilla; Howard Rosenbaum; C Scott Baker
Journal:  Proc Biol Sci       Date:  2014-07-07       Impact factor: 5.349

8.  How robust are "isolation with migration" analyses to violations of the im model? A simulation study.

Authors:  Jared L Strasburg; Loren H Rieseberg
Journal:  Mol Biol Evol       Date:  2009-09-30       Impact factor: 16.240

9.  Howling from the past: historical phylogeography and diversity losses in European grey wolves.

Authors:  Christophe Dufresnes; Christian Miquel; Nadège Remollino; François Biollaz; Nicolas Salamin; Pierre Taberlet; Luca Fumagalli
Journal:  Proc Biol Sci       Date:  2018-08-01       Impact factor: 5.349

Review 10.  Coalescent genealogy samplers: windows into population history.

Authors:  Mary K Kuhner
Journal:  Trends Ecol Evol       Date:  2008-12-26       Impact factor: 17.712

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