| Literature DB >> 17825102 |
Ronald M Bonett1, Kenneth H Kozak, David R Vieites, Alison Bare, Jessica A Wooten, Stanley E Trauth.
Abstract
BACKGROUND: In most regions of the world human influences on the distribution of flora and fauna predate complete biotic surveys. In some cases this challenges our ability to discriminate native from introduced species. This distinction is particularly critical for isolated populations, because relicts of native species may need to be conserved, whereas introduced species may require immediate eradication. Recently an isolated population of seal salamanders, Desmognathus monticola, was discovered on the Ozark Plateau, approximately 700 km west of its broad continuous distribution in the Appalachian Mountains of eastern North America. Using Nested Clade Analysis (NCA) we test whether the Ozark isolate results from population fragmentation (a natural relict) or long distance dispersal (a human-mediated introduction).Entities:
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Year: 2007 PMID: 17825102 PMCID: PMC2020456 DOI: 10.1186/1472-6785-7-7
Source DB: PubMed Journal: BMC Ecol ISSN: 1472-6785 Impact factor: 2.964
Figure 1Distribution and species richness of . A. Species richness of the genus Desmognathus, with the highest species diversity in the southern Appalachian Mountains. Note: Desmognathus are absent from the Ozark Plateau. B. Geographic distribution of Desmognathus monticola outlined in blue overlaid on an elevation map of eastern North America. The isolated population of D. monticola in the Ozarks is designated with a blue star. Inset is a photograph of an adult D. monticola from the Ozarks.
Figure 2Geographic distribution and unrooted statistical parsimony networks for . The large majority of the geographic distribution contains only a few haplotypes (K, L, M, N, O, & P). The Ozark haplotype (F, red) occurs in the southern Appalachians of northern Georgia amongst a great diversity of related haplotypes. Labels on the network indicate the haplotype and the number of counties where it was found (sizes of circles are also drawn proportional to this number). Colors of haplotypes correspond to pie diagrams on the map and show the frequency of haplotyope in each county sampled. Black dots on haplotype network indicate hypothetical unsampled haplotypes.
Comparison of cox1 divergence between Appalachian and Ozark haplotypes. The Ozark population only contains a single haplotype (F). Note the large number of haplotypes restricted to northern Georgia (GA). See Figure two for map and Additional File 1 for locality details.
| A | 1.222% | 1 | GA |
| B | 1.711% | 1 | GA |
| C | 0.733% | 2 | GA |
| D | 1.956% | 1 | GA |
| E | 1.467% | 4 | GA |
| G | 0.978% | 1 | GA |
| H | 0.978% | 1 | GA |
| I | 0.733% | 1 | GA |
| J | 0.978% | 1 | GA |
| K | 1.956% | 1 | GA |
| L | 1.467% | 1 | VA |
| M | 1.711% | 2 | TN |
| N | 1.467% | 1 | NC |
| O | 1.467% | 1 | KY |
| P | 1.222% | 13 | GA, KY, NC, PA, TN, VA, WV |
| Q | 2.934% | 2 | AL, GA |
| R | 2.689% | 1 | GA |
State abbreviations are as follows:
AL = Alabama, AR = Arkansas, GA = Georgia, KY = Kentucky, NC = North Carolina, PA = Pennsylvania, TN = Tennessee, VA = Virginia, and WV = West Virginia.
Figure 3Graphical summary of the nested haplotype structure and NCA. Individual haplotypes are listed across the top, with increasingly more inclusive nested groups extending to the bottom. Interior haplotypes/nested groups are depicted in bold italics. Significant DC, DN, and I-T values are reported. Distances that are significantly small or large are indicated with S or L, respectively. The path taken through the most recent version of the inference key is shown; RGF, restricted gene flow; PF, past fragmentation; LDC, long-distance colonization; RE w/PF, range expansion coupled with past fragmentation. NCA results directly relevant to the diagnosis of the Ozark population (haplotype F) are highlighted in blue.
Figure 4Percent divergence of Appalachian haplotypes to the Ozark population and their geographic distribution. Inset graph depicts the % sequence of the Appalachian haplotypes to the Ozark population and the % of the area of the distribution that they occur. The map shows the genetic landscape of haplotypes in relation to their divergence from the Ozark population. Note that it is necessary to include haplotypes that are ≤ 0.733% divergent from the Ozark population in order to diagnose it as introduced.