Literature DB >> 17822383

Two independent routes of de novo vitamin B6 biosynthesis: not that different after all.

Teresa B Fitzpatrick1, Nikolaus Amrhein, Barbara Kappes, Peter Macheroux, Ivo Tews, Thomas Raschle.   

Abstract

Vitamin B6 is well known in its biochemically active form as pyridoxal 5'-phosphate, an essential cofactor of numerous metabolic enzymes. The vitamin is also implicated in numerous human body functions ranging from modulation of hormone function to its recent discovery as a potent antioxidant. Its de novo biosynthesis occurs only in bacteria, fungi and plants, making it an essential nutrient in the human diet. Despite its paramount importance, its biosynthesis was predominantly investigated in Escherichia coli, where it is synthesized from the condensation of deoxyxylulose 5-phosphate and 4-phosphohydroxy-L-threonine catalysed by the concerted action of PdxA and PdxJ. However, it has now become clear that the majority of organisms capable of producing this vitamin do so via a different route, involving precursors from glycolysis and the pentose phosphate pathway. This alternative pathway is characterized by the presence of two genes, Pdx1 and Pdx2. Their discovery has sparked renewed interest in vitamin B6, and numerous studies have been conducted over the last few years to characterize the new biosynthesis pathway. Indeed, enormous progress has been made in defining the nature of the enzymes involved in both pathways, and important insights have been provided into their mechanisms of action. In the present review, we summarize the recent advances in our knowledge of the biosynthesis of this versatile molecule and compare the two independent routes to the biosynthesis of vitamin B6. Surprisingly, this comparison reveals that the key biosynthetic enzymes of both pathways are, in fact, very similar both structurally and mechanistically.

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Year:  2007        PMID: 17822383     DOI: 10.1042/BJ20070765

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  61 in total

Review 1.  Vitamin and cofactor acquisition in apicomplexans: Synthesis versus salvage.

Authors:  Aarti Krishnan; Joachim Kloehn; Matteo Lunghi; Dominique Soldati-Favre
Journal:  J Biol Chem       Date:  2019-11-25       Impact factor: 5.157

2.  Metabolic diversity among main microorganisms inside an arsenic-rich ecosystem revealed by meta- and proteo-genomics.

Authors:  Philippe N Bertin; Audrey Heinrich-Salmeron; Eric Pelletier; Florence Goulhen-Chollet; Florence Arsène-Ploetze; Sébastien Gallien; Béatrice Lauga; Corinne Casiot; Alexandra Calteau; David Vallenet; Violaine Bonnefoy; Odile Bruneel; Béatrice Chane-Woon-Ming; Jessica Cleiss-Arnold; Robert Duran; Françoise Elbaz-Poulichet; Nuria Fonknechten; Ludovic Giloteaux; David Halter; Sandrine Koechler; Marie Marchal; Damien Mornico; Christine Schaeffer; Adam Alexander Thil Smith; Alain Van Dorsselaer; Jean Weissenbach; Claudine Médigue; Denis Le Paslier
Journal:  ISME J       Date:  2011-05-12       Impact factor: 10.302

3.  Expression analysis of lncRNA AK370814 involved in the barley vitamin B6 salvage pathway under salinity.

Authors:  Elif Karlik; Nermin Gozukirmizi
Journal:  Mol Biol Rep       Date:  2018-10-08       Impact factor: 2.316

4.  Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.

Authors:  Amber Marie Smith; William Clay Brown; Etti Harms; Janet L Smith
Journal:  J Biol Chem       Date:  2015-01-07       Impact factor: 5.157

5.  The pseudoenzyme PDX1.2 boosts vitamin B6 biosynthesis under heat and oxidative stress in Arabidopsis.

Authors:  Cyril Moccand; Svetlana Boycheva; Pedro Surriabre; Marina Tambasco-Studart; Maja Raschke; Markus Kaufmann; Teresa B Fitzpatrick
Journal:  J Biol Chem       Date:  2014-02-06       Impact factor: 5.157

6.  Microspatial gene expression patterns in the Amazon River Plume.

Authors:  Brandon M Satinsky; Byron C Crump; Christa B Smith; Shalabh Sharma; Brian L Zielinski; Mary Doherty; Jun Meng; Shulei Sun; Patricia M Medeiros; John H Paul; Victoria J Coles; Patricia L Yager; Mary Ann Moran
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

7.  Interaction between vitamin B6 metabolism, nitrogen metabolism and autoimmunity.

Authors:  Maite Colinas; Teresa B Fitzpatrick
Journal:  Plant Signal Behav       Date:  2016

8.  Intersubunit cross-talk in pyridoxal 5'-phosphate synthase, coordinated by the C terminus of the synthase subunit.

Authors:  Thomas Raschle; Davide Speziga; Wolfgang Kress; Cyril Moccand; Peter Gehrig; Nikolaus Amrhein; Eilika Weber-Ban; Teresa B Fitzpatrick
Journal:  J Biol Chem       Date:  2008-12-14       Impact factor: 5.157

9.  Organic cofactors in the metabolism of Dehalococcoides mccartyi strains.

Authors:  Christian J Schipp; Ernest Marco-Urrea; Anja Kublik; Jana Seifert; Lorenz Adrian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

10.  The vitamin B₆ biosynthesis pathway in Streptococcus pneumoniae is controlled by pyridoxal 5'-phosphate and the transcription factor PdxR and has an impact on ear infection.

Authors:  Samir El Qaidi; Jun Yang; Jing-Ren Zhang; Dennis W Metzger; Guangchun Bai
Journal:  J Bacteriol       Date:  2013-03-08       Impact factor: 3.490

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