Literature DB >> 17780844

A new look at proton transfer dynamics along the hydrogen bonds in amides and peptides.

G J Kearley, F Fillaux, M H Baron, S Bennington, J Tomkinson.   

Abstract

Vibrational spectroscopy with inelastic neutron scattering can provide spectra that are more detailed and easier to interpret than optical spectra. The spectral intensity depends on energy transfer and kinetic momentum transfer, allowing determination of the potential function. Experiments reveal that the proton involved in intermolecular hydrogen bonding in N-methylacetamide and polyglycine I vibrates almost independently. An ionic representation (N(delta-)...H(+)...O(delta-)) of the hydrogen bond is more realistic than the normally accepted covalent model (NH...O). For polyglycine I, the proton experiences a local, symmetric double-minimum potential arising from dynamic exchange between the amide-like (CONH) and imidol-like (HOCN) forms of the peptide unit.

Entities:  

Year:  1994        PMID: 17780844     DOI: 10.1126/science.264.5163.1285

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  6 in total

1.  Time-dependent density functional theory study on the electronic excited-state hydrogen bonding of the chromophore coumarin 153 in a room-temperature ionic liquid.

Authors:  Dandan Wang; Ce Hao; Se Wang; Hong Dong; Jieshan Qiu
Journal:  J Mol Model       Date:  2011-06-03       Impact factor: 1.810

2.  The partial charge of the nitrogen atom in peptide bonds.

Authors:  E J Milner-White
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

3.  Vibrational neutron spectroscopy of collagen and model polypeptides.

Authors:  H D Middendorf; R L Hayward; S F Parker; J Bradshaw; A Miller
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

4.  Molecular recognition and self-assembly special feature: Encapsulation and characterization of proton-bound amine homodimers in a water-soluble, self-assembled supramolecular host.

Authors:  Michael D Pluth; Dorothea Fiedler; Jeffrey S Mugridge; Robert G Bergman; Kenneth N Raymond
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

5.  Calixarene building block bis(2-hydroxyphenyl)methane (2HDPM) and hydrogen-bonded 2HDPM-H₂O complex in electronic excited state.

Authors:  Se Wang; Ce Hao; Zhanxian Gao; Jingwen Chen; Jieshan Qiu
Journal:  J Mol Model       Date:  2013-01-20       Impact factor: 1.810

6.  Inter- vs. Intramolecular Hydrogen Bond Patterns and Proton Dynamics in Nitrophthalic Acid Associates.

Authors:  Kinga Jóźwiak; Aneta Jezierska; Jarosław J Panek; Eugene A Goremychkin; Peter M Tolstoy; Ilya G Shenderovich; Aleksander Filarowski
Journal:  Molecules       Date:  2020-10-14       Impact factor: 4.411

  6 in total

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