Literature DB >> 17763922

Structural basis of protein-protein interaction studied by NMR.

Yunyu Shi1, Jihui Wu.   

Abstract

This paper describes efforts of the structural genomics project in the nuclear magnetic resonance (NMR) laboratory at the University of Science and Technology of China. This structural genomics project is biological-functional driven. Targets are mainly selected from two systems: proteins related with regulation of gene expression in humans and other eukaryotes, and proteins existing in the cell junction in humans. The majority of proteins selected from these two systems are related with human health and diseases, and some are potential drug targets. Twenty-five protein structures from Homo sapiens and other eukaryotes have been determined during last 5 years in this laboratory. Nuclear magnetic resonance (NMR) spectroscopy is highly suited to investigate molecular interactions at a close physiological condition and is particularly suited for the study of low-affinity, transient complexes. It can provide information on protein surface interaction, their complex structure, and their dynamic properties during protein recognition. Several examples are given in this paper.

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Year:  2007        PMID: 17763922     DOI: 10.1007/s10969-007-9021-8

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  33 in total

Review 1.  Assembly of cell regulatory systems through protein interaction domains.

Authors:  Tony Pawson; Piers Nash
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

2.  Solution structure of calponin homology domain of Human MICAL-1.

Authors:  Hongbin Sun; Haiming Dai; Jiahai Zhang; Xianju Jin; Shangmin Xiong; Jian Xu; Jihui Wu; Yunyu Shi
Journal:  J Biomol NMR       Date:  2006-10-17       Impact factor: 2.835

3.  Solution structure of human Brg1 bromodomain and its specific binding to acetylated histone tails.

Authors:  Weiqun Shen; Chao Xu; Wei Huang; Jiahai Zhang; Justin E Carlson; Xiaoming Tu; Jihui Wu; Yunyu Shi
Journal:  Biochemistry       Date:  2007-02-03       Impact factor: 3.162

4.  Solution structure of human SUMO-3 C47S and its binding surface for Ubc9.

Authors:  Husheng Ding; Yingqi Xu; Quan Chen; Haiming Dai; Yajun Tang; Jihui Wu; Yunyu Shi
Journal:  Biochemistry       Date:  2005-03-01       Impact factor: 3.162

5.  Solution structure of Kti11p from Saccharomyces cerevisiae reveals a novel zinc-binding module.

Authors:  Jianping Sun; Jiahai Zhang; Fangming Wu; Chao Xu; Shujun Li; Wei Zhao; Ziyu Wu; Jihui Wu; Cong-Zhao Zhou; Yunyu Shi
Journal:  Biochemistry       Date:  2005-06-21       Impact factor: 3.162

6.  NMR structure and regulated expression in APL cell of human SH3BGRL3.

Authors:  Chao Xu; Peizheng Zheng; Shuhong Shen; Yingqi Xu; Ling Wei; Hengjun Gao; Shengnian Wang; Chongri Zhu; Yajun Tang; Jihui Wu; Qinghua Zhang; Yunyu Shi
Journal:  FEBS Lett       Date:  2005-04-20       Impact factor: 4.124

7.  Solution structure of AF-6 PDZ domain and its interaction with the C-terminal peptides from Neurexin and Bcr.

Authors:  Heyue Zhou; Yingqi Xu; Yuedong Yang; Anding Huang; Jihui Wu; Yunyu Shi
Journal:  J Biol Chem       Date:  2005-01-31       Impact factor: 5.157

8.  Solution structure and DNA binding property of the fifth HMG box domain in comparison with the first HMG box domain in human upstream binding factor.

Authors:  Wulin Yang; Yingqi Xu; Jihui Wu; Wangyong Zeng; Yunyu Shi
Journal:  Biochemistry       Date:  2003-02-25       Impact factor: 3.162

9.  Binding model of human coactosin-like protein with filament actin revealed by mutagenesis.

Authors:  Haiming Dai; Wei Huang; Jian Xu; Bo Yao; Shangmin Xiong; Husheng Ding; Yajun Tang; Haiyan Liu; Jihui Wu; Yunyu Shi
Journal:  Biochim Biophys Acta       Date:  2006-09-23

10.  Loss of BRG1/BRM in human lung cancer cell lines and primary lung cancers: correlation with poor prognosis.

Authors:  David N Reisman; Janiece Sciarrotta; Weidong Wang; William K Funkhouser; Bernard E Weissman
Journal:  Cancer Res       Date:  2003-02-01       Impact factor: 12.701

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  2 in total

1.  Involvement of distinct arrestin-1 elements in binding to different functional forms of rhodopsin.

Authors:  Tiandi Zhuang; Qiuyan Chen; Min-Kyu Cho; Sergey A Vishnivetskiy; Tina M Iverson; Vsevolod V Gurevich; Charles R Sanders
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

2.  The interaction between the measles virus nucleoprotein and the Interferon Regulator Factor 3 relies on a specific cellular environment.

Authors:  Matteo Colombo; Jean-Marie Bourhis; Celia Chamontin; Carine Soriano; Stéphanie Villet; Stéphanie Costanzo; Marie Couturier; Valérie Belle; André Fournel; Hervé Darbon; Denis Gerlier; Sonia Longhi
Journal:  Virol J       Date:  2009-05-15       Impact factor: 4.099

  2 in total

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