Literature DB >> 17721510

A diverse family of thermostable cytochrome P450s created by recombination of stabilizing fragments.

Yougen Li1, D Allan Drummond, Andrew M Sawayama, Christopher D Snow, Jesse D Bloom, Frances H Arnold.   

Abstract

Thermostable enzymes combine catalytic specificity with the toughness required to withstand industrial reaction conditions. Stabilized enzymes also provide robust starting points for evolutionary improvement of other protein properties. We recently created a library of at least 2,300 new active chimeras of the biotechnologically important cytochrome P450 enzymes. Here we show that a chimera's thermostability can be predicted from the additive contributions of its sequence fragments. Based on these predictions, we constructed a family of 44 novel thermostable P450s with half-lives of inactivation at 57 degrees C up to 108 times that of the most stable parent. Although they differ by as many as 99 amino acids from any known P450, the stable sequences are catalytically active. Among the novel functions they exhibit is the ability to produce drug metabolites. This chimeric P450 family provides a unique ensemble for biotechnological applications and for studying sequence-stability-function relationships.

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Year:  2007        PMID: 17721510     DOI: 10.1038/nbt1333

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  45 in total

1.  Recombination of protein fragments: a promising approach toward engineering proteins with novel nanomechanical properties.

Authors:  M M Balamurali; Deepak Sharma; Anderson Chang; Dingyue Khor; Ricky Chu; Hongbin Li
Journal:  Protein Sci       Date:  2008-07-14       Impact factor: 6.725

2.  A family of thermostable fungal cellulases created by structure-guided recombination.

Authors:  Pete Heinzelman; Christopher D Snow; Indira Wu; Catherine Nguyen; Alan Villalobos; Sridhar Govindarajan; Jeremy Minshull; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-23       Impact factor: 11.205

3.  Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins.

Authors:  Claire N Bedbrook; Austin J Rice; Kevin K Yang; Xiaozhe Ding; Siyuan Chen; Emily M LeProust; Viviana Gradinaru; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-10       Impact factor: 11.205

4.  Chimeragenesis of distantly-related proteins by noncontiguous recombination.

Authors:  Matthew A Smith; Philip A Romero; Timothy Wu; Eric M Brustad; Frances H Arnold
Journal:  Protein Sci       Date:  2012-12-29       Impact factor: 6.725

5.  Navigating the protein fitness landscape with Gaussian processes.

Authors:  Philip A Romero; Andreas Krause; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

6.  Consensus protein design without phylogenetic bias.

Authors:  Christian Jäckel; Jesse D Bloom; Peter Kast; Frances H Arnold; Donald Hilvert
Journal:  J Mol Biol       Date:  2010-04-28       Impact factor: 5.469

7.  A panel of cytochrome P450 BM3 variants to produce drug metabolites and diversify lead compounds.

Authors:  Andrew M Sawayama; Michael M Y Chen; Palaniappan Kulanthaivel; Ming-Shang Kuo; Horst Hemmerle; Frances H Arnold
Journal:  Chemistry       Date:  2009-11-02       Impact factor: 5.236

Review 8.  Exploring protein fitness landscapes by directed evolution.

Authors:  Philip A Romero; Frances H Arnold
Journal:  Nat Rev Mol Cell Biol       Date:  2009-12       Impact factor: 94.444

9.  SCHEMA recombination of a fungal cellulase uncovers a single mutation that contributes markedly to stability.

Authors:  Pete Heinzelman; Christopher D Snow; Matthew A Smith; Xinlin Yu; Arvind Kannan; Kevin Boulware; Alan Villalobos; Sridhar Govindarajan; Jeremy Minshull; Frances H Arnold
Journal:  J Biol Chem       Date:  2009-07-22       Impact factor: 5.157

10.  Predicting protein thermostability changes from sequence upon multiple mutations.

Authors:  Ludovica Montanucci; Piero Fariselli; Pier Luigi Martelli; Rita Casadio
Journal:  Bioinformatics       Date:  2008-07-01       Impact factor: 6.937

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