Literature DB >> 17720834

Comparison of direct genome restriction enzyme analysis and pulsed-field gel electrophoresis for typing of Vibrio vulnificus and their correspondence with multilocus sequence typing data.

Narjol González-Escalona1, Brooke Whitney, Lee-Ann Jaykus, Angelo DePaola.   

Abstract

We compared the potential of direct genome restriction enzyme analysis (DGREA) and pulsed-field gel electrophoresis (PFGE) for discriminating Vibrio vulnificus isolates from clinical (23) and environmental (17) sources. The genotypes generated by both methodologies were compared to previous multilocus sequence typing (MLST) data. DGREA established clearer relationships among V. vulnificus strains and was more consistent with MLST than with PFGE. DGREA is a very promising tool for epidemiological and ecological studies of V. vulnificus.

Entities:  

Mesh：

Substances：

Year:  2007        PMID： 17720834      PMCID： PMC2168220          DOI： 10.1128/AEM.00738-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  24 in total

1.  Improving typeability of multiple bacterial species using pulsed-field gel electrophoresis and thiourea.

Authors:  Suzane Silbert; Linda Boyken; Richard J Hollis; Michael A Pfaller
Journal:  Diagn Microbiol Infect Dis       Date:  2003-12       Impact factor: 2.803

2.  Genetic distinctions among clinical and environmental strains of Vibrio vulnificus.

Authors:  Maria Chatzidaki-Livanis; Michael A Hubbard; Katrina Gordon; Valerie J Harwood; Anita C Wright
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

3.  Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel. Israel Vibrio Study Group.

Authors:  N Bisharat; V Agmon; R Finkelstein; R Raz; G Ben-Dror; L Lerner; S Soboh; R Colodner; D N Cameron; D L Wykstra; D L Swerdlow; J J Farmer
Journal:  Lancet       Date:  1999-10-23       Impact factor: 79.321

4.  Molecular typing of vibrio vulnificus isolated from clinical specimens by pulsed-field gel electrophoresis and random amplified polymorphic DNA analysis.

Authors:  D W Ryang; S B Koo; M G Shin; J H Shin; S P Suh
Journal:  Jpn J Infect Dis       Date:  1999-04       Impact factor: 1.362

5.  A real-time PCR assay for the rapid determination of 16S rRNA genotype in Vibrio vulnificus.

Authors:  Michael C L Vickery; William B Nilsson; Mark S Strom; Jessica L Nordstrom; Angelo DePaola
Journal:  J Microbiol Methods       Date:  2006-10-27       Impact factor: 2.363

6.  Analysis of Vibrio vulnificus from market oysters and septicemia cases for virulence markers.

Authors:  Angelo DePaola; Jessica L Nordstrom; Anders Dalsgaard; Anita Forslund; James Oliver; Tonya Bates; Keri L Bourdage; Paul A Gulig
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

7.  Multilocus sequence typing has better discriminatory ability for typing Vibrio cholerae than does pulsed-field gel electrophoresis and provides a measure of phylogenetic relatedness.

Authors:  Mamuka Kotetishvili; O Colin Stine; Yuansha Chen; Arnold Kreger; Alexander Sulakvelidze; Shanmuga Sozhamannan; J Glenn Morris
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

8.  Population genetics of Vibrio vulnificus: identification of two divisions and a distinct eel-pathogenic clone.

Authors:  Michaela Gutacker; Nadine Conza; Cinzia Benagli; Ambra Pedroli; Marco Valerio Bernasconi; Lise Permin; Rosa Aznar; Jean-Claude Piffaretti
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

9.  Variation in the 16S-23S rRNA intergenic spacer regions in Vibrio parahaemolyticus strains are due to indels nearby their tRNAGlu.

Authors:  Narjol González-Escalona; Jaime Romero; Carlos A Guzmán; Romilio T Espejo
Journal:  FEMS Microbiol Lett       Date:  2006-03       Impact factor: 2.742

10.  Sequence polymorphism of the 16S rRNA gene of Vibrio vulnificus is a possible indicator of strain virulence.

Authors:  William B Nilsson; Rohinee N Paranjype; Angelo DePaola; Mark S Strom
Journal:  J Clin Microbiol       Date:  2003-01       Impact factor: 5.948
View more
  9 in total

1.  Genotypic diversity and virulence characteristics of clinical and environmental Vibrio vulnificus isolates from the Baltic Sea region.

Authors:  Nadja Bier; Silke Bechlars; Susanne Diescher; Florian Klein; Gerhard Hauk; Oliver Duty; Eckhard Strauch; Ralf Dieckmann
Journal:  Appl Environ Microbiol       Date:  2013-03-29       Impact factor: 4.792

2.  Salmonella enterica diversity in central Californian coastal waterways.

Authors:  Sarah P Walters; Narjol González-Escalona; Insook Son; David C Melka; Lauren M Sassoubre; Alexandria B Boehm
Journal:  Appl Environ Microbiol       Date:  2013-04-26       Impact factor: 4.792

3.  Ecological diversification reveals routes of pathogen emergence in endemic Vibrio vulnificus populations.

Authors:  Mario López-Pérez; Jane M Jayakumar; Trudy-Ann Grant; Asier Zaragoza-Solas; Pedro J Cabello-Yeves; Salvador Almagro-Moreno
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-30       Impact factor: 11.205

4.  PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species.

Authors:  Maria Hoffmann; Eric W Brown; Peter C H Feng; Christine E Keys; Markus Fischer; Steven R Monday
Journal:  BMC Microbiol       Date:  2010-03-23       Impact factor: 3.605

5.  Vibrio chromosomes share common history.

Authors:  Benjamin C Kirkup; LeeAnn Chang; Sarah Chang; Dirk Gevers; Martin F Polz
Journal:  BMC Microbiol       Date:  2010-05-10       Impact factor: 3.605

6.  Genetic relatedness among tdh+ and trh+ Vibrio parahaemolyticus cultured from Gulf of Mexico oysters (Crassostrea virginica) and surrounding water and sediment.

Authors:  C N Johnson; A R Flowers; V C Young; N Gonzalez-Escalona; A DePaola; N F Noriea; D J Grimes
Journal:  Microb Ecol       Date:  2008-07-08       Impact factor: 4.552

7.  Genotypic Characterization of Vibrio vulnificus Clinical Isolates in Korea.

Authors:  Hye Sook Jeong; Jun Young Kim; Se Mi Jeon; Mi Sun Park; Seong Han Kim
Journal:  Osong Public Health Res Perspect       Date:  2011-04-27

8.  Clinical characteristics and molecular subtyping of Vibrio vulnificus illnesses, Israel.

Authors:  Ronit Zaidenstein; Chantal Sadik; Larisa Lerner; Lea Valinsky; June Kopelowitz; Ruth Yishai; Vered Agmon; Michele Parsons; Cheryl Bopp; Miriam Weinberger
Journal:  Emerg Infect Dis       Date:  2008-12       Impact factor: 6.883

9.  Genotypic Diversity and Population Structure of Vibrio vulnificus Strains Isolated in Taiwan and Korea as Determined by Multilocus Sequence Typing.

Authors:  Hye-Jin Kim; Jae-Chang Cho
Journal:  PLoS One       Date:  2015-11-23       Impact factor: 3.240
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.