Literature DB >> 17716132

Nanopore-based single-molecule DNA analysis.

Ken Healy1.   

Abstract

Nanopore-based DNA analysis is a single-molecule technique with revolutionary potential. It promises to carry out a range of analyses, orders of magnitude faster than current methods, including length measurement, specific sequence detection, single-molecule dynamics and even de novo sequencing. The concept involves using an applied voltage to drive DNA molecules through a narrow pore that separates chambers of electrolyte solution. This voltage also drives a flow of electrolyte ions through the pore, measured as an electric current. When molecules pass through the pore, they block the flow of ions and, thus, their structure and length can be determined based on the degree and duration of the resulting current reductions. In this review, I explain the nanopore-based DNA analysis concept and briefly explore its historical foundations, before discussing and summarizing all experimental results reported to date. I conclude with a summary of the obstacles that must be overcome for it to realize its promised potential.

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Year:  2007        PMID: 17716132     DOI: 10.2217/17435889.2.4.459

Source DB:  PubMed          Journal:  Nanomedicine (Lond)        ISSN: 1743-5889            Impact factor:   5.307


  32 in total

1.  Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays.

Authors:  Ben McNally; Alon Singer; Zhiliang Yu; Yingjie Sun; Zhiping Weng; Amit Meller
Journal:  Nano Lett       Date:  2010-06-09       Impact factor: 11.189

Review 2.  Applications of biological pores in nanomedicine, sensing, and nanoelectronics.

Authors:  Sheereen Majd; Erik C Yusko; Yazan N Billeh; Michael X Macrae; Jerry Yang; Michael Mayer
Journal:  Curr Opin Biotechnol       Date:  2010-06-18       Impact factor: 9.740

3.  Distinguishable populations report on the interactions of single DNA molecules with solid-state nanopores.

Authors:  Michiel van den Hout; Vincent Krudde; Xander J A Janssen; Nynke H Dekker
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

4.  Fingerprinting of Peptides with a Large Channel of Bacteriophage Phi29 DNA Packaging Motor.

Authors:  Zhouxiang Ji; Shaoying Wang; Zhengyi Zhao; Zhi Zhou; Farzin Haque; Peixuan Guo
Journal:  Small       Date:  2016-07-20       Impact factor: 13.281

5.  Molecular control of ionic conduction in polymer nanopores.

Authors:  Eduardo R Cruz-Chu; Thorsten Ritz; Zuzanna S Siwy; Klaus Schulten
Journal:  Faraday Discuss       Date:  2009       Impact factor: 4.008

6.  DNA translocation governed by interactions with solid-state nanopores.

Authors:  Meni Wanunu; Jason Sutin; Ben McNally; Andrew Chow; Amit Meller
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

7.  Nonexponential kinetics of DNA escape from alpha-hemolysin nanopores.

Authors:  Matthew Wiggin; Carolina Tropini; Vincent Tabard-Cossa; Nahid N Jetha; Andre Marziali
Journal:  Biophys J       Date:  2008-09-05       Impact factor: 4.033

8.  A molecular dynamics simulation study on trapping ions in a nanoscale Paul trap.

Authors:  Xiongce Zhao; Predrag S Krstic
Journal:  Nanotechnology       Date:  2008-04-08       Impact factor: 3.874

Review 9.  Controlling molecular transport through nanopores.

Authors:  Ulrich F Keyser
Journal:  J R Soc Interface       Date:  2011-06-29       Impact factor: 4.118

Review 10.  Nanopore sensors for nucleic acid analysis.

Authors:  Bala Murali Venkatesan; Rashid Bashir
Journal:  Nat Nanotechnol       Date:  2011-09-18       Impact factor: 39.213

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