Literature DB >> 17711324

Topographical variation in metabolic signatures of human gastrointestinal biopsies revealed by high-resolution magic-angle spinning 1H NMR spectroscopy.

Yulan Wang1, Elaine Holmes, Elena M Comelli, Grigorios Fotopoulos, Gian Dorta, Huiru Tang, Mattias J Rantalainen, John C Lindon, Irène E Corthésy-Theulaz, Laurent B Fay, Sunil Kochhar, Jeremy K Nicholson.   

Abstract

Individual and topographical variation in the metabolic profiles of multiple human gastrointestinal tract (GIT) biopsies have been characterized using high-resolution magic-angle spinning (HRMAS) 1H NMR spectroscopy and pattern recognition. Samples from antrum, duodenum, jejunum, ileum, and transverse colon were obtained from 8 male and 8 female participants. Each gut region generated a highly characteristic metabolic profile consistent with the varying structural and functional properties of the tissue at different longitudinal levels of the gut. The antral (stomach) mucosa contained higher levels of choline, glycogen, phosphorylethanolamine, and taurine than other gut regions. The spatially close regions of the duodenum and jejunum were equivalent in terms of their gross biochemical composition with high levels of choline, glutathione, glycerophosphocholine (GPC), and lipids relative to other gut regions. The ileal mucosa showed poor discrimination from the duodenum and jejunum tissues and generated strong amino acids signatures but had relative low GPC signals. The colon (large intestine) was high in acetate, glutamate, inositols, and lactate and low in creatine, GPC, and taurine compared to the small intestine. These longitudinal metabolic variations in the human GIT could be attributed to functional variations in energy metabolism, osmoregulation, gut microbial activity, and oxidative protection. This work indicates that 1H HRMAS NMR studies may be of value in analyzing local metabolic variation due to pathological processes in gut biopsies.

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Year:  2007        PMID: 17711324     DOI: 10.1021/pr0702565

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  20 in total

1.  Assessing hepatic metabolic changes during progressive colonization of germ-free mouse by 1H NMR spectroscopy.

Authors:  Peter Heath; Sandrine Paule Claus
Journal:  J Vis Exp       Date:  2011-12-15       Impact factor: 1.355

2.  High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues.

Authors:  Olaf Beckonert; Muireann Coen; Hector C Keun; Yulan Wang; Timothy M D Ebbels; Elaine Holmes; John C Lindon; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2010-05-13       Impact factor: 13.491

3.  Glycerophosphocholine utilization by Candida albicans: role of the Git3 transporter in virulence.

Authors:  Andrew C Bishop; Shantanu Ganguly; Norma V Solis; Benjamin M Cooley; Michael I Jensen-Seaman; Scott G Filler; Aaron P Mitchell; Jana Patton-Vogt
Journal:  J Biol Chem       Date:  2013-10-10       Impact factor: 5.157

4.  Robust utilization of phospholipase-generated metabolites, glycerophosphodiesters, by Candida albicans: role of the CaGit1 permease.

Authors:  Andrew C Bishop; Tao Sun; Mitchell E Johnson; Vincent M Bruno; Jana Patton-Vogt
Journal:  Eukaryot Cell       Date:  2011-10-07

Review 5.  Applications of high-resolution magic angle spinning MRS in biomedical studies II-Human diseases.

Authors:  Christopher Dietz; Felix Ehret; Francesco Palmas; Lindsey A Vandergrift; Yanni Jiang; Vanessa Schmitt; Vera Dufner; Piet Habbel; Johannes Nowak; Leo L Cheng
Journal:  NMR Biomed       Date:  2017-09-15       Impact factor: 4.044

Review 6.  The intestinal microbiota, gastrointestinal environment and colorectal cancer: a putative role for probiotics in prevention of colorectal cancer?

Authors:  M Andrea Azcárate-Peril; Michael Sikes; José M Bruno-Bárcena
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2011-06-23       Impact factor: 4.052

7.  Characterization of synovial tissue from arthritis patients: a proton magnetic resonance spectroscopic investigation.

Authors:  Carol A Hitchon; Hani S El-Gabalawy; Tedros Bezabeh
Journal:  Rheumatol Int       Date:  2009-01-28       Impact factor: 2.631

8.  Metabolomic applications to decipher gut microbial metabolic influence in health and disease.

Authors:  François-Pierre J Martin; Sebastiano Collino; Serge Rezzi; Sunil Kochhar
Journal:  Front Physiol       Date:  2012-04-26       Impact factor: 4.566

9.  Panorganismal metabolic response modeling of an experimental Echinostoma caproni infection in the mouse.

Authors:  Jasmina Saric; Jia V Li; Yulan Wang; Jennifer Keiser; Kirill Veselkov; Stephan Dirnhofer; Ivan K S Yap; Jeremy K Nicholson; Elaine Holmes; Jürg Utzinger
Journal:  J Proteome Res       Date:  2009-08       Impact factor: 4.466

10.  Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes.

Authors:  Sandrine P Claus; Tsz M Tsang; Yulan Wang; Olivier Cloarec; Eleni Skordi; François-Pierre Martin; Serge Rezzi; Alastair Ross; Sunil Kochhar; Elaine Holmes; Jeremy K Nicholson
Journal:  Mol Syst Biol       Date:  2008-10-14       Impact factor: 11.429

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