Literature DB >> 17709386

Mutations in the ubiquitin binding UBZ motif of DNA polymerase eta do not impair its function in translesion synthesis during replication.

Narottam Acharya1, Amrita Brahma, Lajos Haracska, Louise Prakash, Satya Prakash.   

Abstract

Treatment of Saccharomyces cerevisiae cells with DNA-damaging agents elicits lysine 164-linked PCNA monoubiquitination by Rad6-Rad18. Recently, a number of ubiquitin (Ub) binding domains (UBDs) have been identified in translesion synthesis (TLS) DNA polymerases and it has been proposed that the UBD in a TLS polymerase affects its binding to Ub on PCNA and that this binding mode is indispensable for a TLS polymerase to access PCNA at the site of a stalled replication fork. To evaluate the contribution of the binding of UBDs to the Ub moiety on PCNA in TLS, we have examined the effects of mutations in the C2H2 zinc binding motif and in the conserved D570 residue that lies in the alpha-helix portion of the UBZ domain of yeast Poleta. We find that mutations in the C2H2 motif have no perceptible effect on UV sensitivity or UV mutagenesis, whereas a mutation of the D570 residue adversely affects Poleta function. The stimulation of DNA synthesis by Poleta with PCNA or Ub-PCNA was not affected by mutations in the C2H2 motif or the D570 residue. These observations lead us to suggest that the binding of Ub on PCNA via its UBZ domain is not a necessary requirement for the ability of polymerase eta to function in TLS during replication.

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Year:  2007        PMID: 17709386      PMCID: PMC2168893          DOI: 10.1128/MCB.01196-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  28 in total

1.  Two RING finger proteins mediate cooperation between ubiquitin-conjugating enzymes in DNA repair.

Authors:  H D Ulrich; S Jentsch
Journal:  EMBO J       Date:  2000-07-03       Impact factor: 11.598

2.  RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO.

Authors:  Carsten Hoege; Boris Pfander; George-Lucian Moldovan; George Pyrowolakis; Stefan Jentsch
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

3.  UBA domains of DNA damage-inducible proteins interact with ubiquitin.

Authors:  B L Bertolaet; D J Clarke; M Wolff; M H Watson; M Henze; G Divita; S I Reed
Journal:  Nat Struct Biol       Date:  2001-05

4.  Requirement of RAD5 and MMS2 for postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae.

Authors:  Carlos A Torres-Ramos; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

5.  Targeting of human DNA polymerase iota to the replication machinery via interaction with PCNA.

Authors:  L Haracska; R E Johnson; I Unk; B B Phillips; J Hurwitz; L Prakash; S Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

6.  Stimulation of DNA synthesis activity of human DNA polymerase kappa by PCNA.

Authors:  Lajos Haracska; Ildiko Unk; Robert E Johnson; Barbara B Phillips; Jerard Hurwitz; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

7.  Interaction with PCNA is essential for yeast DNA polymerase eta function.

Authors:  L Haracska; C M Kondratick; I Unk; S Prakash; L Prakash
Journal:  Mol Cell       Date:  2001-08       Impact factor: 17.970

8.  Physical and functional interactions of human DNA polymerase eta with PCNA.

Authors:  L Haracska; R E Johnson; I Unk; B Phillips; J Hurwitz; L Prakash; S Prakash
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

9.  UBA domains mediate protein-protein interactions between two DNA damage-inducible proteins.

Authors:  B L Bertolaet; D J Clarke; M Wolff; M H Watson; M Henze; G Divita; S I Reed
Journal:  J Mol Biol       Date:  2001-11-09       Impact factor: 5.469

10.  E3-independent monoubiquitination of ubiquitin-binding proteins.

Authors:  Daniela Hoeller; Christina-Maria Hecker; Sebastian Wagner; Vladimir Rogov; Volker Dötsch; Ivan Dikic
Journal:  Mol Cell       Date:  2007-06-22       Impact factor: 17.970

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  27 in total

1.  Mutational specificity and genetic control of replicative bypass of an abasic site in yeast.

Authors:  Vincent Pagès; Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-17       Impact factor: 11.205

Review 2.  Replicating damaged DNA in eukaryotes.

Authors:  Nimrat Chatterjee; Wolfram Siede
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

3.  Regulation of polymerase exchange between Poleta and Poldelta by monoubiquitination of PCNA and the movement of DNA polymerase holoenzyme.

Authors:  Zhihao Zhuang; Robert E Johnson; Lajos Haracska; Louise Prakash; Satya Prakash; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-02       Impact factor: 11.205

4.  Identification of two functional PCNA-binding domains in human DNA polymerase κ.

Authors:  Jung-Hoon Yoon; Narottam Acharya; Jeseong Park; Debashree Basu; Satya Prakash; Louise Prakash
Journal:  Genes Cells       Date:  2014-05-22       Impact factor: 1.891

Review 5.  DNA polymerase eta and chemotherapeutic agents.

Authors:  Kai-ming Chou
Journal:  Antioxid Redox Signal       Date:  2011-03-18       Impact factor: 8.401

6.  A novel ubiquitin binding mode in the S. cerevisiae translesion synthesis DNA polymerase η.

Authors:  Yongxing Ai; Jialiang Wang; Robert E Johnson; Lajos Haracska; Louise Prakash; Zhihao Zhuang
Journal:  Mol Biosyst       Date:  2011-04-11

Review 7.  Mismatch-mediated error prone repair at the immunoglobulin genes.

Authors:  Richard Chahwan; Winfried Edelmann; Matthew D Scharff; Sergio Roa
Journal:  Biomed Pharmacother       Date:  2011-10-24       Impact factor: 6.529

8.  The unusual UBZ domain of Saccharomyces cerevisiae polymerase η.

Authors:  Rachel V Woodruff; Martha G Bomar; Sanjay D'Souza; Pei Zhou; Graham C Walker
Journal:  DNA Repair (Amst)       Date:  2010-09-15

9.  Pre-Steady-State Kinetic Analysis of Truncated and Full-Length Saccharomyces cerevisiae DNA Polymerase Eta.

Authors:  Jessica A Brown; Likui Zhang; Shanen M Sherrer; John-Stephen Taylor; Peter M J Burgers; Zucai Suo
Journal:  J Nucleic Acids       Date:  2010-07-25

Review 10.  PCNA modifications for regulation of post-replication repair pathways.

Authors:  Kyoo-young Lee; Kyungjae Myung
Journal:  Mol Cells       Date:  2008-06-04       Impact factor: 5.034

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