Literature DB >> 17698658

The Chilo iridescent virus DNA polymerase promoter contains an essential AAAAT motif.

Remziye Nalçacioglu1, Ikbal Agah Ince, Just M Vlak, Zihni Demirbag, Monique M van Oers.   

Abstract

The delayed-early DNA polymerase promoter of Chilo iridescent virus (CIV), officially known as Invertebrate iridescent virus, was fine mapped by constructing a series of increasing deletions and by introducing point mutations. The effects of these mutations were examined in a luciferase reporter gene system using Bombyx mori cells transfected with promoter constructs and infected with CIV. When the size of the upstream element was reduced from position -19 to -15, relative to the transcriptional start site, the luciferase activity was reduced to almost zero. Point mutations showed that each of the 5 nt (AAAAT) located between -19 and -15 were equally essential for promoter activity. Mutations at individual bases around the transcription initiation site showed that the promoter extended until position -2 upstream of the transcription start site. South-Western analysis showed that a protein of approximately 100 kDa interacted with the -19 nt promoter fragment in CIV-infected cells. This binding did not occur with a point mutant that lacked promoter activity. The AAAAT motif was also found in the DNA polymerase promoter region of other iridoviruses and in other putative CIV delayed-early genes.

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Year:  2007        PMID: 17698658     DOI: 10.1099/vir.0.82947-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  8 in total

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Review 5.  Promoter Motifs in NCLDVs: An Evolutionary Perspective.

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Review 6.  Invertebrate Iridoviruses: A Glance over the Last Decade.

Authors:  İkbal Agah İnce; Orhan Özcan; Ayca Zeynep Ilter-Akulke; Erin D Scully; Arzu Özgen
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7.  Putative Promoter Motif Analyses Reinforce the Evolutionary Relationships Among Faustoviruses, Kaumoebavirus, and Asfarvirus.

Authors:  Graziele P Oliveira; Isabella L M de Aquino; Ana P M F Luiz; Jônatas S Abrahão
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8.  Rana grylio virus thymidine kinase gene: an early gene of iridovirus encoding for a cytoplasmic protein.

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  8 in total

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