Literature DB >> 17698418

A method for linking computed image features to histological semantics in neuropathology.

B Lessmann1, T W Nattkemper, V H Hans, A Degenhard.   

Abstract

In medical image analysis the image content is often represented by features computed from the pixel matrix in order to support the development of improved clinical diagnosis systems. These features need to be interpreted and understood at a clinical level of understanding Many features are of abstract nature, as for instance features derived from a wavelet transform. The interpretation and analysis of such features are difficult. This lack of coincidence between computed features and their meaning for a user in a given situation is commonly referred to as the semantic gap. In this work, we propose a method for feature analysis and interpretation based on the simultaneous visualization of feature and image domain. Histopathological images of meningiomas WHO (World Health Organization) grade I are represented by features derived from color transforms and the Discrete Wavelet Transform. The wavelet-based feature space is then visualized and explored using unsupervised machine learning methods. We show how to analyze and select features according to their relevance for the description of clinically relevant characteristics.

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Mesh:

Year:  2007        PMID: 17698418     DOI: 10.1016/j.jbi.2007.06.007

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  12 in total

1.  Effect of radiation dose reduction on texture measures of trabecular bone microstructure: an in vitro study.

Authors:  Muthu Rama Krishnan Mookiah; Thomas Baum; Kai Mei; Felix K Kopp; Georg Kaissis; Peter Foehr; Peter B Noel; Jan S Kirschke; Karupppasamy Subburaj
Journal:  J Bone Miner Metab       Date:  2017-04-07       Impact factor: 2.626

2.  Automated prostate tissue referencing for cancer detection and diagnosis.

Authors:  Jin Tae Kwak; Stephen M Hewitt; André Alexander Kajdacsy-Balla; Saurabh Sinha; Rohit Bhargava
Journal:  BMC Bioinformatics       Date:  2016-06-01       Impact factor: 3.169

3.  Biological Interpretation of Morphological Patterns in Histopathological Whole-Slide Images.

Authors:  Sonal Kothari; John H Phan; Adeboye O Osunkoya; May D Wang
Journal:  ACM BCB       Date:  2012-10

4.  The diagnostic value of texture analysis in predicting WHO grades of meningiomas based on ADC maps: an attempt using decision tree and decision forest.

Authors:  Yiping Lu; Li Liu; Shihai Luan; Ji Xiong; Daoying Geng; Bo Yin
Journal:  Eur Radiol       Date:  2018-08-07       Impact factor: 5.315

5.  Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis.

Authors:  Christian Held; Tim Nattkemper; Ralf Palmisano; Thomas Wittenberg
Journal:  J Pathol Inform       Date:  2013-03-30

6.  A supervised visual model for finding regions of interest in basal cell carcinoma images.

Authors:  Ricardo Gutiérrez; Francisco Gómez; Lucía Roa-Peña; Eduardo Romero
Journal:  Diagn Pathol       Date:  2011-03-29       Impact factor: 2.644

7.  Learning regions of interest from low level maps in virtual microscopy.

Authors:  David Romo; Eduardo Romero; Fabio González
Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

Review 8.  Pathology imaging informatics for quantitative analysis of whole-slide images.

Authors:  Sonal Kothari; John H Phan; Todd H Stokes; May D Wang
Journal:  J Am Med Inform Assoc       Date:  2013-08-19       Impact factor: 4.497

9.  Breast cancer characterization based on image classification of tissue sections visualized under low magnification.

Authors:  C Loukas; S Kostopoulos; A Tanoglidi; D Glotsos; C Sfikas; D Cavouras
Journal:  Comput Math Methods Med       Date:  2013-08-31       Impact factor: 2.238

10.  Computer-aided diagnosis of skin lesions using conventional digital photography: a reliability and feasibility study.

Authors:  Wen-Yu Chang; Adam Huang; Chung-Yi Yang; Chien-Hung Lee; Yin-Chun Chen; Tian-Yau Wu; Gwo-Shing Chen
Journal:  PLoS One       Date:  2013-11-04       Impact factor: 3.240

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