Literature DB >> 17696539

Refolding foldamers: triazene-arylene oligomers that change shape with chemical stimuli.

Simin Liu1, Peter Y Zavalij, Yiu-Fai Lam, Lyle Isaacs.   

Abstract

We describe the preparation of five triazene-arylene oligomers (3, 4, 7, 8, and 11) and investigations of their folding properties in aqueous solution. These oligomers contain four 2-fold rotors and populate a conformational ensemble comprising at least 10 states. Extensive 1D and 2D NMR studies as well as X-ray crystallography establish that the presence of three members of the cucurbit[n]uril family (CB[n]), CB[10], CB[7], and CB[8], results in the selective population of the (a,a,a,a)-, (a,s,s,a)-, and (a,a,a,s)-conformers. As a result of the high affinity and highly selective binding properties of the CB[n] family, it is possible to fold a single foldamer strand (3) into the CB[8].(a,a,a,s)-3 conformer by the addition of CB[8], then unfold and refold it into the CB[7].(a,s,s,a)-3.CB[7] conformer by addition of CB[7] and 3,5-dimethylaminoadamantane (17), then unfold and refold it again into the CB[10].(a,a,a,a)-3 conformer by addition of CB[10].CB[5] and aminoadamantane (18). The transformation of CB[8].(a,a,a,s)-3 into CB[7].(a,s,s,a)-3.CB[7] proceeds through the intermediacy of CB [8].(a,a,s,a)-3.CB[7], which enhances the rate of dissociation of strand 3 from CB[8].

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17696539     DOI: 10.1021/ja073320s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  8 in total

1.  Macromolecular Crystallography for Synthetic Abiological Molecules: Combining xMDFF and PHENIX for Structure Determination of Cyanostar Macrocycles.

Authors:  Abhishek Singharoy; Balasubramanian Venkatakrishnan; Yun Liu; Christopher G Mayne; Semin Lee; Chun-Hsing Chen; Adam Zlotnick; Klaus Schulten; Amar H Flood
Journal:  J Am Chem Soc       Date:  2015-06-29       Impact factor: 15.419

2.  An efficient chemical approach to bispecific antibodies and antibodies of high valency.

Authors:  Julia I Gavrilyuk; Ulrich Wuellner; Syed Salahuddin; Rajib K Goswami; Subhash C Sinha; Carlos F Barbas
Journal:  Bioorg Med Chem Lett       Date:  2009-05-18       Impact factor: 2.823

3.  Synthesis and self-assembly processes of monofunctionalized cucurbit[7]uril.

Authors:  Brittany Vinciguerra; Liping Cao; Joe R Cannon; Peter Y Zavalij; Catherine Fenselau; Lyle Isaacs
Journal:  J Am Chem Soc       Date:  2012-07-30       Impact factor: 15.419

4.  Triazine-based tool box for developing peptidic PET imaging probes: syntheses, microfluidic radiolabeling, and structure-activity evaluation.

Authors:  Hairong Li; Haiying Zhou; Stephanie Krieger; Jesse J Parry; Joseph J Whittenberg; Amit V Desai; Buck E Rogers; Paul J A Kenis; David E Reichert
Journal:  Bioconjug Chem       Date:  2014-04-04       Impact factor: 4.774

5.  Stimuli responsive systems constructed using cucurbit[n]uril-type molecular containers.

Authors:  Lyle Isaacs
Journal:  Acc Chem Res       Date:  2014-05-02       Impact factor: 22.384

6.  Triazine-Based Sequence-Defined Polymers with Side-Chain Diversity and Backbone-Backbone Interaction Motifs.

Authors:  Jay W Grate; Kai-For Mo; Michael D Daily
Journal:  Angew Chem Int Ed Engl       Date:  2016-02-10       Impact factor: 15.336

7.  A pH-Switchable Triple Hydrogen-Bonding Motif.

Authors:  Heather M Coubrough; Barbora Balonova; Christopher M Pask; Barry A Blight; Andrew J Wilson
Journal:  ChemistryOpen       Date:  2020-01-08       Impact factor: 2.911

8.  A triazine-based BODIPY trimer as a molecular viscometer.

Authors:  Sangram L Raut; Joseph D Kimball; Rafal Fudala; Ilkay Bora; Rahul Chib; Hana Jaafari; Marlius K Castillo; Nicholas W Smith; Ignacy Gryczynski; Sergei V Dzyuba; Zygmunt Gryczynski
Journal:  Phys Chem Chem Phys       Date:  2016-02-14       Impact factor: 3.676

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.