Literature DB >> 17694076

The SAGA continues: expanding the cellular role of a transcriptional co-activator complex.

S P Baker1, P A Grant.   

Abstract

Throughout the last decade, great advances have been made in our understanding of how DNA-templated cellular processes occur in the native chromatin environment. Proteins that regulate transcription, replication, DNA repair, mitosis and other processes must be targeted to specific regions of the genome and granted access to DNA, which is normally tightly packaged in the higher-order chromatin structure of eukaryotic nuclei. Massive multiprotein complexes have been discovered, which facilitate access to DNA and recruitment of downstream effectors through three distinct mechanisms: chemical modification of histone amino-acid residues, ATP-dependent chromatin remodeling and histone exchange. The yeast Spt-Ada-Gcn5-Acetyl transferase (SAGA) transcriptional co-activator complex regulates numerous cellular processes through coordination of multiple histone post-translational modifications. SAGA is known to generate and interact with a number of histone modifications, including acetylation, methylation, ubiquitylation and phosphorylation. Although best characterized for its role in regulating transcriptional activation, SAGA is also required for optimal transcription elongation, mRNA export and perhaps nucleotide excision repair. Here, we discuss findings from recent years that have elucidated the function of this 1.8-MDa complex in multiple cellular processes, and how misregulation of the homologous complexes in humans may ultimately play a role in development of disease.

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Year:  2007        PMID: 17694076      PMCID: PMC2746020          DOI: 10.1038/sj.onc.1210603

Source DB:  PubMed          Journal:  Oncogene        ISSN: 0950-9232            Impact factor:   9.867


  99 in total

1.  The mRNA export factor Sus1 is involved in Spt/Ada/Gcn5 acetyltransferase-mediated H2B deubiquitinylation through its interaction with Ubp8 and Sgf11.

Authors:  Alwin Köhler; Pau Pascual-García; Ana Llopis; Meritxell Zapater; Francesc Posas; Ed Hurt; Susana Rodríguez-Navarro
Journal:  Mol Biol Cell       Date:  2006-07-19       Impact factor: 4.138

2.  Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II.

Authors:  Rushad Pavri; Bing Zhu; Guohong Li; Patrick Trojer; Subhrangsu Mandal; Ali Shilatifard; Danny Reinberg
Journal:  Cell       Date:  2006-05-19       Impact factor: 41.582

3.  Double chromodomains cooperate to recognize the methylated histone H3 tail.

Authors:  John F Flanagan; Li-Zhi Mi; Maksymilian Chruszcz; Marcin Cymborowski; Katrina L Clines; Youngchang Kim; Wladek Minor; Fraydoon Rastinejad; Sepideh Khorasanizadeh
Journal:  Nature       Date:  2005-12-22       Impact factor: 49.962

4.  Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions.

Authors:  Chhabi K Govind; Fan Zhang; Hongfang Qiu; Kimberly Hofmeyer; Alan G Hinnebusch
Journal:  Mol Cell       Date:  2007-01-12       Impact factor: 17.970

5.  SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope.

Authors:  Ghislain G Cabal; Auguste Genovesio; Susana Rodriguez-Navarro; Christophe Zimmer; Olivier Gadal; Annick Lesne; Henri Buc; Frank Feuerbach-Fournier; Jean-Christophe Olivo-Marin; Eduard C Hurt; Ulf Nehrbass
Journal:  Nature       Date:  2006-06-08       Impact factor: 49.962

6.  SWI/SNF binding to the HO promoter requires histone acetylation and stimulates TATA-binding protein recruitment.

Authors:  Doyel Mitra; Emily J Parnell; Jack W Landon; Yaxin Yu; David J Stillman
Journal:  Mol Cell Biol       Date:  2006-06       Impact factor: 4.272

7.  Structural polymorphism of chromodomains in Chd1.

Authors:  Masahiko Okuda; Masami Horikoshi; Yoshifumi Nishimura
Journal:  J Mol Biol       Date:  2006-10-14       Impact factor: 5.469

8.  Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo.

Authors:  Abhijit Shukla; Nadia Stanojevic; Zhen Duan; Payel Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

9.  SAGA-associated Sgf73p facilitates formation of the preinitiation complex assembly at the promoters either in a HAT-dependent or independent manner in vivo.

Authors:  Abhijit Shukla; Pratibha Bajwa; Sukesh R Bhaumik
Journal:  Nucleic Acids Res       Date:  2006-11-07       Impact factor: 16.971

10.  Roles for Gcn5p and Ada2p in transcription and nucleotide excision repair at the Saccharomyces cerevisiae MET16 gene.

Authors:  J A Ferreiro; N G Powell; N Karabetsou; J Mellor; R Waters
Journal:  Nucleic Acids Res       Date:  2006-02-09       Impact factor: 16.971

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  98 in total

1.  Yeast zinc cluster proteins Dal81 and Uga3 cooperate by targeting common coactivators for transcriptional activation of γ-aminobutyrate responsive genes.

Authors:  Marc-André Sylvain; Xiao Bei Liang; Karen Hellauer; Bernard Turcotte
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

2.  Cellular GCN5 is a novel regulator of human adenovirus E1A-conserved region 3 transactivation.

Authors:  Jailal N G Ablack; Michael Cohen; Gobi Thillainadesan; Gregory J Fonseca; Peter Pelka; Joe Torchia; Joe S Mymryk
Journal:  J Virol       Date:  2012-05-23       Impact factor: 5.103

3.  A role for intersubunit interactions in maintaining SAGA deubiquitinating module structure and activity.

Authors:  Nadine L Samara; Alison E Ringel; Cynthia Wolberger
Journal:  Structure       Date:  2012-07-05       Impact factor: 5.006

4.  SAGA complex mediates the transcriptional up-regulation of antiviral RNA silencing.

Authors:  Ida Bagus Andika; Atif Jamal; Hideki Kondo; Nobuhiro Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-11       Impact factor: 11.205

Review 5.  Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes.

Authors:  Francisca E Reyes-Turcu; Karen H Ventii; Keith D Wilkinson
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

6.  The Gcn5 bromodomain of the SAGA complex facilitates cooperative and cross-tail acetylation of nucleosomes.

Authors:  Shanshan Li; Michael A Shogren-Knaak
Journal:  J Biol Chem       Date:  2009-02-13       Impact factor: 5.157

7.  Cross-talk between histone H3 tails produces cooperative nucleosome acetylation.

Authors:  Shanshan Li; Michael A Shogren-Knaak
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-12       Impact factor: 11.205

8.  HAT-HDAC interplay modulates global histone H3K14 acetylation in gene-coding regions during stress.

Authors:  Anna Johnsson; Mickaël Durand-Dubief; Yongtao Xue-Franzén; Michelle Rönnerblad; Karl Ekwall; Anthony Wright
Journal:  EMBO Rep       Date:  2009-07-24       Impact factor: 8.807

9.  A novel histone fold domain-containing protein that replaces TAF6 in Drosophila SAGA is required for SAGA-dependent gene expression.

Authors:  Vikki M Weake; Selene K Swanson; Arcady Mushegian; Laurence Florens; Michael P Washburn; Susan M Abmayr; Jerry L Workman
Journal:  Genes Dev       Date:  2009-12-15       Impact factor: 11.361

Review 10.  Targeting the SAGA and ATAC Transcriptional Coactivator Complexes in MYC-Driven Cancers.

Authors:  Lisa Maria Mustachio; Jason Roszik; Aimee Farria; Sharon Y R Dent
Journal:  Cancer Res       Date:  2020-02-24       Impact factor: 12.701

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