Literature DB >> 17684278

Salinicoccus luteus sp. nov., isolated from a desert soil.

Yu-Qin Zhang1,2, Li-Yan Yu2, Hong-Yu Liu2, Yue-Qin Zhang2, Li-Hua Xu1, Wen-Jun Li1.   

Abstract

A moderately halophilic bacterium, strain YIM 70202(T), was isolated from a desert soil sample collected from Egypt and was subjected to a taxonomic investigation. In a phylogenetic dendrogram based on 16S rRNA gene sequence analysis, strain YIM 70202(T) was affiliated to the Salinicoccus clade, showing 94.5-96.8 % 16S rRNA gene sequence similarity to the recognized species of the genus Salinicoccus, in which Salinicoccus roseus CCM 3516(T) was the nearest neighbour. The DNA-DNA relatedness value of the novel isolate with S. roseus CCM 3516(T) was 12.7 %. The novel isolate grew at temperatures between 4 and 45 degrees C and at pH values ranging from 7.0 to 11.0, with an optimum of 30 degrees C and pH 8.0-9.0, respectively. Strain YIM 70202(T) grew optimally in the presence of 10 % NaCl (w/v) and growth was observed at NaCl concentrations in the range 1-25 % (w/v). Chemotaxonomic data revealed that strain YIM 70202(T) contained MK-6 as the predominant respiratory quinone, possessed L-Lys-Gly(5) as the cell-wall peptidoglycan, had phosphatidylglycerol, diphosphatidylglycerol and an unknown glycolipid as the polar lipids and contained i-C(15 : 0) and ai-C(15 : 0) as the predominant fatty acids. The DNA G+C content was 49.7 mol%. The biochemical and chemotaxonomic properties demonstrate that strain YIM 70202(T) represents a novel species of the genus Salinicoccus. The name Salinicoccus luteus sp. nov. is proposed with strain YIM 70202(T) (=CGMCC 1.6511(T)=KCTC 3941(T)) as the type strain.

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Year:  2007        PMID: 17684278     DOI: 10.1099/ijs.0.64967-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Salinicoccus salitudinis sp. nov., a new moderately halophilic bacterium isolated from a saline soil sample.

Authors:  Yi-Guang Chen; Xiao-Long Cui; Wen-Jun Li; Li-Hua Xu; Meng-Liang Wen; Qian Peng; Cheng-Lin Jiang
Journal:  Extremophiles       Date:  2007-12-01       Impact factor: 2.395

2.  Bacterial Communities in Concrete Reflect Its Composite Nature and Change with Weathering.

Authors:  E Anders Kiledal; Jessica L Keffer; Julia A Maresca
Journal:  mSystems       Date:  2021-05-04       Impact factor: 6.496

3.  Whole genome sequencing and annotation of halophilic Salinicoccus sp. BAB 3246 isolated from the coastal region of Gujarat.

Authors:  Vishal Mevada; Shradhdha Patel; Jignesh Pandya; Himani Joshi; Rajesh Patel
Journal:  Genom Data       Date:  2017-06-21
  3 in total

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