Literature DB >> 17684267

Flavisolibacter ginsengiterrae gen. nov., sp. nov. and Flavisolibacter ginsengisoli sp. nov., isolated from ginseng cultivating soil.

Min-Ho Yoon1, Wan-Taek Im2.   

Abstract

Two strains (Gsoil 492(T) and Gsoil 643(T)) isolated in Pocheon Province, South Korea, from soil used for ginseng cultivation were characterized using a polyphasic approach. Both isolates comprised Gram-negative, aerobic, non-motile, rod-shaped bacteria. They had similar chemotaxonomic characteristics, e.g. containing MK-7 as the major quinone, having a DNA G+C content in the range 42.5-43.3 mol% and possessing iso-C(15 : 0) and iso-C(17 : 0) 3-OH as the major fatty acids. A phylogenetic analysis based on 16S rRNA gene sequences indicated that the two isolates formed a tight cluster with several uncultured bacterial clones and with the established genera Terrimonas, Niastella and Chitinophaga in the phylum Bacteroidetes but were clearly separate from these genera. The levels of 16S rRNA gene sequence similarity between the isolates and type strains of related genera ranged from 87.5 to 92.4 %. Furthermore, the results of physiological and biochemical tests allowed phenotypic differentiation of the isolates from phylogenetically closely related species with validly published names. The level of 16S rRNA gene sequence similarity between the two strains was 99.5 %, whereas the DNA-DNA relatedness value was 44 %, indicating that they represent separate species. On the basis of the polyphasic evidence, a novel genus, Flavisolibacter gen. nov., and two novel species, Flavisolibacter ginsengiterrae sp. nov. (type strain Gsoil 492(T)=KCTC 12656(T)=DSM 18136(T)) and Flavisolibacter ginsengisoli sp. nov. (type strain Gsoil 643(T)=KCTC 12657(T)=DSM 18119(T)), are proposed. Flavisolibacter ginsengiterrae is the type species of the genus.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17684267     DOI: 10.1099/ijs.0.65011-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

1.  Identification of benzo[a]pyrene-metabolizing bacteria in forest soils by using DNA-based stable-isotope probing.

Authors:  Mengke Song; Chunling Luo; Longfei Jiang; Dayi Zhang; Yujie Wang; Gan Zhang
Journal:  Appl Environ Microbiol       Date:  2015-08-07       Impact factor: 4.792

2.  Bacterial Diversity in Bentonites, Engineered Barrier for Deep Geological Disposal of Radioactive Wastes.

Authors:  Margarita Lopez-Fernandez; Andrea Cherkouk; Ramiro Vilchez-Vargas; Ruy Jauregui; Dietmar Pieper; Nico Boon; Ivan Sanchez-Castro; Mohamed L Merroun
Journal:  Microb Ecol       Date:  2015-05-30       Impact factor: 4.552

3.  Isolation, characterisation and genome analysis of a novel ginsenosides hydrolysing bacterium Ginsengibacter hankyongi gen. nov., sp. nov. isolated from soil.

Authors:  Muhammad Zubair Siddiqi; Md Amdadul Huq; Wan-Taek Im
Journal:  Antonie Van Leeuwenhoek       Date:  2020-11-23       Impact factor: 2.271

4.  Flavisolibacter longurius sp. nov., isolated from soil.

Authors:  Soohyun Maeng; Yuna Park; Sang Eun Lee; Joo Hyun Han; Jaewoo Bai; Myung Kyum Kim
Journal:  Arch Microbiol       Date:  2021-03-20       Impact factor: 2.552

5.  Bacterial community structure along moisture gradients in the parafluvial sediments of two ephemeral desert streams.

Authors:  Lydia H Zeglin; Clifford N Dahm; John E Barrett; Michael N Gooseff; Shannon K Fitpatrick; Cristina D Takacs-Vesbach
Journal:  Microb Ecol       Date:  2010-12-09       Impact factor: 4.552

6.  Flavisolibacter aluminii sp. nov., a novel member of the genus Flavisolibacter isolated from an automotive air conditioning system.

Authors:  Hyosun Lee; Dong-Uk Kim; Suyeon Lee; Song-Gun Kim; A-Young Park; Jae-Hyung Ahn; Jong-Ok Ka
Journal:  J Microbiol       Date:  2018-11-19       Impact factor: 3.422

7.  Flavisolibacter swuensis sp. nov. isolated from soil.

Authors:  Eun Sun Joo; Seho Cha; Myung Kyum Kim; Weonhwa Jheong; Taegun Seo; Sathiyaraj Srinivasan
Journal:  J Microbiol       Date:  2015-06-27       Impact factor: 3.422

8.  Illumina amplicon sequencing of 16S rRNA tag reveals bacterial community development in the rhizosphere of apple nurseries at a replant disease site and a new planting site.

Authors:  Jian Sun; Qiang Zhang; Jia Zhou; Qinping Wei
Journal:  PLoS One       Date:  2014-10-31       Impact factor: 3.240

9.  Genome-Based Taxonomic Classification of Bacteroidetes.

Authors:  Richard L Hahnke; Jan P Meier-Kolthoff; Marina García-López; Supratim Mukherjee; Marcel Huntemann; Natalia N Ivanova; Tanja Woyke; Nikos C Kyrpides; Hans-Peter Klenk; Markus Göker
Journal:  Front Microbiol       Date:  2016-12-20       Impact factor: 5.640

10.  Copolymers enhance selective bacterial community colonization for potential root zone applications.

Authors:  Vy T H Pham; Pandiyan Murugaraj; Falko Mathes; Boon K Tan; Vi Khanh Truong; Daniel V Murphy; David E Mainwaring
Journal:  Sci Rep       Date:  2017-11-21       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.