Literature DB >> 17683280

A novel DNA helicase with strand-annealing activity from the crenarchaeon Sulfolobus solfataricus.

Mariarita De Felice1, Valentina Aria, Luca Esposito, Mariarosaria De Falco, Biagio Pucci, Mosè Rossi, Francesca M Pisani.   

Abstract

To protect their genetic material cells adopt different mechanisms linked to DNA replication, recombination and repair. Several proteins function at the interface of these DNA transactions. In the present study, we report on the identification of a novel archaeal DNA helicase. BlastP searches of the Sulfolobus solfataricus genome database allowed us to identify an open reading frame (SSO0112, 875 amino acid residues) having sequence similarity with the human RecQ5beta. The corresponding protein, termed Hel112 by us, was produced in Escherichia coli in soluble form, purified to homogeneity and characterized. Gel-filtration chromatography and glycerol-gradient sedimentation analyses revealed that Hel112 forms monomers and dimers in solution. Biochemical characterization of the two oligomeric species revealed that only the monomeric form has an ATP-dependent 3'-5' DNA-helicase activity, whereas, unexpectedly, both the monomeric and dimeric forms possess DNA strand-annealing capability. The Hel112 monomeric form is able to unwind forked and 3'-tailed DNA structures with high efficiency, whereas it is almost inactive on blunt-ended duplexes and bubble-containing molecules. This analysis reveals that S. solfataricus Hel112 shares some enzymatic features with the RecQ-like DNA helicases and suggests potential cellular functions of this protein.

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Year:  2007        PMID: 17683280      PMCID: PMC2049073          DOI: 10.1042/BJ20070134

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  31 in total

1.  Oligomeric ring structure of the Bloom's syndrome helicase.

Authors:  J K Karow; R H Newman; P S Freemont; I D Hickson
Journal:  Curr Biol       Date:  1999-06-03       Impact factor: 10.834

Review 2.  Structure and function of RecQ DNA helicases.

Authors:  Richard J Bennett; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Mar-Apr       Impact factor: 8.250

Review 3.  A putative nucleic acid-binding domain in Bloom's and Werner's syndrome helicases.

Authors:  V Morozov; A R Mushegian; E V Koonin; P Bork
Journal:  Trends Biochem Sci       Date:  1997-11       Impact factor: 13.807

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  RecQ family members combine strand pairing and unwinding activities to catalyze strand exchange.

Authors:  Amrita Machwe; Liren Xiao; Joanna Groden; Steven W Matson; David K Orren
Journal:  J Biol Chem       Date:  2005-04-20       Impact factor: 5.157

6.  Purification and characterization of the Sgs1 DNA helicase activity of Saccharomyces cerevisiae.

Authors:  R J Bennett; J A Sharp; J C Wang
Journal:  J Biol Chem       Date:  1998-04-17       Impact factor: 5.157

7.  Identification of a novel helicase activity unwinding branched DNAs from the hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Ryosuke Fujikane; Kayoko Komori; Hideo Shinagawa; Yoshizumi Ishino
Journal:  J Biol Chem       Date:  2005-01-27       Impact factor: 5.157

8.  Human RECQ5beta, a protein with DNA helicase and strand-annealing activities in a single polypeptide.

Authors:  Patrick L Garcia; Yilun Liu; Josef Jiricny; Stephen C West; Pavel Janscak
Journal:  EMBO J       Date:  2004-07-08       Impact factor: 11.598

9.  Archaeal Hel308 helicase targets replication forks in vivo and in vitro and unwinds lagging strands.

Authors:  Colin P Guy; Edward L Bolt
Journal:  Nucleic Acids Res       Date:  2005-06-30       Impact factor: 16.971

10.  The Bloom's syndrome helicase promotes the annealing of complementary single-stranded DNA.

Authors:  Chit Fang Cheok; Leonard Wu; Patrick L Garcia; Pavel Janscak; Ian D Hickson
Journal:  Nucleic Acids Res       Date:  2005-07-15       Impact factor: 16.971

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  12 in total

1.  Synergic and opposing activities of thermophilic RecQ-like helicase and topoisomerase 3 proteins in Holliday junction processing and replication fork stabilization.

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Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

2.  Analysis of the DNA translocation and unwinding activities of T4 phage helicases.

Authors:  Senthil K Perumal; Kevin D Raney; Stephen J Benkovic
Journal:  Methods       Date:  2010-02-17       Impact factor: 3.608

Review 3.  Genome stability: recent insights in the topoisomerase reverse gyrase and thermophilic DNA alkyltransferase.

Authors:  Antonella Vettone; Giuseppe Perugino; Mosè Rossi; Anna Valenti; Maria Ciaramella
Journal:  Extremophiles       Date:  2014-08-08       Impact factor: 2.395

4.  The Sulfolobus solfataricus RecQ-like DNA helicase Hel112 inhibits the NurA/HerA complex exonuclease activity.

Authors:  Mariarosaria De Falco; Federica Massa; Mosè Rossi; Mariarita De Felice
Journal:  Extremophiles       Date:  2018-02-27       Impact factor: 2.395

5.  DNA Processing Proteins Involved in the UV-Induced Stress Response of Sulfolobales.

Authors:  Marleen van Wolferen; Xiaoqing Ma; Sonja-Verena Albers
Journal:  J Bacteriol       Date:  2015-07-06       Impact factor: 3.490

6.  RNA processing machineries in Archaea: the 5'-3' exoribonuclease aRNase J of the β-CASP family is engaged specifically with the helicase ASH-Ski2 and the 3'-5' exoribonucleolytic RNA exosome machinery.

Authors:  Duy Khanh Phung; Clarisse Etienne; Manon Batista; Petra Langendijk-Genevaux; Yann Moalic; Sébastien Laurent; Sophie Liuu; Violette Morales; Mohamed Jebbar; Gwennaele Fichant; Marie Bouvier; Didier Flament; Béatrice Clouet-d'Orval
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

Review 7.  Distinct roles of RECQ1 in the maintenance of genomic stability.

Authors:  Yuliang Wu; Robert M Brosh
Journal:  DNA Repair (Amst)       Date:  2010-01-12

8.  Unwinding and rewinding: double faces of helicase?

Authors:  Yuliang Wu
Journal:  J Nucleic Acids       Date:  2012-07-19

Review 9.  Chromatin structure and dynamics in hot environments: architectural proteins and DNA topoisomerases of thermophilic archaea.

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10.  Human Pif1 helicase unwinds synthetic DNA structures resembling stalled DNA replication forks.

Authors:  Tresa George; Qin Wen; Richard Griffiths; Anil Ganesh; Mark Meuth; Cyril M Sanders
Journal:  Nucleic Acids Res       Date:  2009-08-21       Impact factor: 16.971

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