Literature DB >> 17675162

Novel method for preparation of the template DNA and selection of primers to differentiate the material rice cultivars of rice wine by PCR.

Ken'ichi Ohtsubo1, Keitaro Suzuki, Kazutomo Haraguchi, Sumiko Nakamura.   

Abstract

As many rice wine brewers label the name of the cultivar of the material rice, authentication technology is necessary. The problems are (1) decomposition of DNAs during the fermentation, (2) contamination of DNAs from microorganisms, (3) co-existence of PCR inhibitors, such as polyphenols. The present authors improved the PCR method by (1) lyophilizing and pulverizing the rice wine to concentrate DNAs, (2) decomposition of starches and proteins so as not to inhibit DNA extraction by the use of heat-resistant amylase and proteinase K, (3) purification of the template DNA by the combination of CTAB method and fractional precipitation by 70% EtOH. To prevent the amplification of microorganism's DNAs during PCR, the present authors selected the suitable plant-specific primers. It became possible to prepare the template DNAs for PCR from the rice wine. The sequences of the amplified DNAs by PCR were ascertained to be same with those of material rice. Mislabeling of material rice cultivar was detected by PCR using the commercial rice wine. It became possible to extract and purify the template DNAs for PCR from the rice wine and to differentiate the material rice cultivars by the PCR using the rice wine as a sample.

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Year:  2007        PMID: 17675162     DOI: 10.1016/j.jbbm.2007.07.001

Source DB:  PubMed          Journal:  J Biochem Biophys Methods        ISSN: 0165-022X


  2 in total

Review 1.  Review of methods for the detection and quantification of adulteration of rice: Basmati as a case study.

Authors:  Lakshminarayana R Vemireddy; V V Satyavathi; E A Siddiq; J Nagaraju
Journal:  J Food Sci Technol       Date:  2014-09-26       Impact factor: 2.701

2.  Identification of constituent herbs in ginseng decoctions by DNA markers.

Authors:  Yat-Tung Lo; Ming Li; Pang-Chui Shaw
Journal:  Chin Med       Date:  2015-01-30       Impact factor: 5.455

  2 in total

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