Literature DB >> 17672875

Diagnosis of common dermatophyte infections by a novel multiplex real-time polymerase chain reaction detection/identification scheme.

M Arabatzis1, L E S Bruijnesteijn van Coppenraet, E J Kuijper, G S de Hoog, A P M Lavrijsen, K Templeton, E M H van der Raaij-Helmer, A Velegraki, Y Gräser, R C Summerbell.   

Abstract

BACKGROUND: In the absence of a functional dermatophyte-specific polymerase chain reaction (PCR), current diagnosis of dermatophytoses, which constitute the commonest communicable diseases worldwide, relies on microscopy and culture. This combination of techniques is time-consuming and notoriously low in sensitivity.
OBJECTIVES: Recent dermatophyte gene sequence records were used to design a real-time PCR assay for detection and identification of dermatophytes in clinical specimens in less than 24 h. PATIENTS AND METHODS: Two assays based on amplification of ribosomal internal transcribed spacer regions and on the use of probes specific to relevant species and species-complexes were designed, optimised and clinically evaluated. One assay was for detecting the Trichophyton mentagrophytes species complex plus T. tonsurans and T. violaceum. The second assayed for the T. rubrum species complex, Microsporum canis and M. audouinii.
RESULTS: The analytical sensitivity of both assays was 0.1 pg DNA per reaction, corresponding to 2.5-3.3 genomes per sample. The protocol was clinically evaluated over 6 months by testing 92 skin, nail and hair specimens from 67 patients with suspected dermatophytosis. Real-time PCR detected and correctly identified the causal agent in specimens from which T. rubrum, T. interdigitale, M. audouinii or T. violaceum grew in culture, and also identified a dermatophyte species in an additional seven specimens that were negative in microscopy and culture.
CONCLUSIONS: This highly sensitive assay also proved to have high positive and negative predictive values (95.7% and 100%), facilitating the accurate, rapid diagnosis conducive to targeted rather than empirical therapy for dermatophytoses.

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Year:  2007        PMID: 17672875     DOI: 10.1111/j.1365-2133.2007.08100.x

Source DB:  PubMed          Journal:  Br J Dermatol        ISSN: 0007-0963            Impact factor:   9.302


  12 in total

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Journal:  J Clin Microbiol       Date:  2010-04-26       Impact factor: 5.948

2.  Restriction analysis of β-tubulin gene for differentiation of the common pathogenic dermatophytes.

Authors:  Mahdi Abastabar; Hossein Mirhendi; Ali Rezaei-Matehkolaei; Mohammad Reza Shidfar; Parivash Kordbacheh; Koichi Makimura
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Review 3.  Reappraisal of Conventional Diagnosis for Dermatophytes.

Authors:  Marc Pihet; Yohann Le Govic
Journal:  Mycopathologia       Date:  2016-10-07       Impact factor: 2.574

4.  [Molecular biological detection of dermatophytes in clinical samples when onychomycosis or tinea pedis is suspected. A prospective study comparing conventional dermatomycological diagnostics and polymerase chain reaction].

Authors:  I Winter; S Uhrlaß; C Krüger; J Herrmann; G Bezold; A Winter; S Barth; J C Simon; Y Gräser; P Nenoff
Journal:  Hautarzt       Date:  2013-04       Impact factor: 0.751

5.  Rapid detection of dermatophytes from skin and hair.

Authors:  Jaya Garg; Ragini Tilak; Atul Garg; Pradyot Prakash; Anil Kumar Gulati; Gopal Nath
Journal:  BMC Res Notes       Date:  2009-04-18

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Journal:  PLoS One       Date:  2015-08-21       Impact factor: 3.240

7.  Laser therapy for onychomycosis in patients with diabetes at risk for foot complications: study protocol for a randomized, double-blind, controlled trial (LASER-1).

Authors:  Leonie Nijenhuis-Rosien; Nanne Kleefstra; Maurice J Wolfhagen; Klaas H Groenier; Henk J G Bilo; Gijs W D Landman
Journal:  Trials       Date:  2015-03-22       Impact factor: 2.279

8.  Internal Transcribed Spacer rDNA and TEF-1α Gene Sequencing of Pathogenic Dermatophyte Species and Differentiation of Closely Related Species Using PCR-RFLP of The Topoisomerase II.

Authors:  Zahra Salehi; Masoomeh Shams-Ghahfarokhi; Mehdi Razzaghi-Abyaneh
Journal:  Cell J       Date:  2019-09-08       Impact factor: 2.479

Review 9.  Non-culture based assays for the detection of fungal pathogens.

Authors:  S Otašević; S Momčilović; N M Stojanović; M Skvarč; K Rajković; V Arsić-Arsenijević
Journal:  J Mycol Med       Date:  2018-03-29       Impact factor: 2.391

10.  A simple multiplex polymerase chain reaction assay for rapid identification of the common pathogenic dermatophytes: Trichophyton interdigitale, Trichophyton rubrum, and Epidermophyton floccosum.

Authors:  Sama Faramarzi; Marjan Motamedi; Ali Rezaei-Matehkolaei; Shima Aboutalebian; Saham Ansari; Mojtaba Didehdar; Mehran Bahadoran; Hossein Mirhendi
Journal:  Curr Med Mycol       Date:  2021-06
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