Literature DB >> 17670940

The molecular basis of eukaryotic transcription.

Roger D Kornberg1.   

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Year:  2007        PMID: 17670940      PMCID: PMC1941834          DOI: 10.1073/pnas.0704138104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  38 in total

1.  Architecture of RNA polymerase II and implications for the transcription mechanism.

Authors:  P Cramer; D A Bushnell; J Fu; A L Gnatt; B Maier-Davis; N E Thompson; R R Burgess; A M Edwards; P R David; R D Kornberg
Journal:  Science       Date:  2000-04-28       Impact factor: 47.728

2.  Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.

Authors:  A L Gnatt; P Cramer; J Fu; D A Bushnell; R D Kornberg
Journal:  Science       Date:  2001-04-19       Impact factor: 47.728

3.  Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution.

Authors:  Katsuhiko S Murakami; Shoko Masuda; Seth A Darst
Journal:  Science       Date:  2002-05-17       Impact factor: 47.728

4.  Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.

Authors:  Katsuhiko S Murakami; Shoko Masuda; Elizabeth A Campbell; Oriana Muzzin; Seth A Darst
Journal:  Science       Date:  2002-05-17       Impact factor: 47.728

5.  Structure of the yeast RNA polymerase II holoenzyme: Mediator conformation and polymerase interaction.

Authors:  Joshua A Davis; Yuichiro Takagi; Roger D Kornberg; Francisco A Asturias
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

6.  A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II.

Authors:  Henri-Marc Bourbon; Andres Aguilera; Aseem Z Ansari; Francisco J Asturias; Arnold J Berk; Stefan Bjorklund; T Keith Blackwell; Tilman Borggrefe; Michael Carey; Marian Carlson; Joan W Conaway; Ronald C Conaway; Scott W Emmons; Joseph D Fondell; Leonard P Freedman; Toshio Fukasawa; Claes M Gustafsson; Min Han; Xi He; Paul K Herman; Alan G Hinnebusch; Steen Holmberg; Frank C Holstege; Judith A Jaehning; Young-Joon Kim; Laurent Kuras; Achim Leutz; John T Lis; Michael Meisterernest; Anders M Naar; Kim Nasmyth; Jeffrey D Parvin; Mark Ptashne; Danny Reinberg; Hans Ronne; Ivan Sadowski; Hiroshi Sakurai; Matthias Sipiczki; Paul W Sternberg; David J Stillman; Randy Strich; Kevin Struhl; Jasper Q Svejstrup; Simon Tuck; Fred Winston; Robert G Roeder; Roger D Kornberg
Journal:  Mol Cell       Date:  2004-06-04       Impact factor: 17.970

7.  Structural basis of transcription: separation of RNA from DNA by RNA polymerase II.

Authors:  Kenneth D Westover; David A Bushnell; Roger D Kornberg
Journal:  Science       Date:  2004-02-13       Impact factor: 47.728

8.  Yeast RNA polymerase II at 5 A resolution.

Authors:  J Fu; A L Gnatt; D A Bushnell; G J Jensen; N E Thompson; R R Burgess; P R David; R D Kornberg
Journal:  Cell       Date:  1999-09-17       Impact factor: 41.582

9.  Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.

Authors:  David A Bushnell; Kenneth D Westover; Ralph E Davis; Roger D Kornberg
Journal:  Science       Date:  2004-02-13       Impact factor: 47.728

10.  Nucleosomes unfold completely at a transcriptionally active promoter.

Authors:  Hinrich Boeger; Joachim Griesenbeck; J Seth Strattan; Roger D Kornberg
Journal:  Mol Cell       Date:  2003-06       Impact factor: 17.970

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  171 in total

1.  REF4 and RFR1, subunits of the transcriptional coregulatory complex mediator, are required for phenylpropanoid homeostasis in Arabidopsis.

Authors:  Nicholas D Bonawitz; Whitney L Soltau; Michael R Blatchley; Brendan L Powers; Anna K Hurlock; Leslie A Seals; Jing-Ke Weng; Jake Stout; Clint Chapple
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

2.  Importance of steric effects on the efficiency and fidelity of transcription by T7 RNA polymerase.

Authors:  Sébastien Ulrich; Eric T Kool
Journal:  Biochemistry       Date:  2011-11-01       Impact factor: 3.162

3.  Oct-1 cooperates with the TATA binding initiation complex to control rapid transcription of human iNOS.

Authors:  Sylvie Reveneau; Thodoris G Petrakis; Christopher E Goldring; Aurélie Chantôme; Jean-François Jeannin; Alena Pance
Journal:  Cell Mol Life Sci       Date:  2012-02-19       Impact factor: 9.261

4.  Promoter melting triggered by bacterial RNA polymerase occurs in three steps.

Authors:  Jie Chen; Seth A Darst; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-01       Impact factor: 11.205

5.  Structural basis for active site closure by the poliovirus RNA-dependent RNA polymerase.

Authors:  Peng Gong; Olve B Peersen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-10       Impact factor: 11.205

6.  The TFIIB tip domain couples transcription initiation to events involved in RNA processing.

Authors:  Khiem Tran; Jay D Gralla
Journal:  J Biol Chem       Date:  2010-09-29       Impact factor: 5.157

Review 7.  NF-κB, the first quarter-century: remarkable progress and outstanding questions.

Authors:  Matthew S Hayden; Sankar Ghosh
Journal:  Genes Dev       Date:  2012-02-01       Impact factor: 11.361

8.  Gene regulation and noise reduction by coupling of stochastic processes.

Authors:  Alexandre F Ramos; José Eduardo M Hornos; John Reinitz
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-02-26

Review 9.  Structural basis for H3K4 trimethylation by yeast Set1/COMPASS.

Authors:  Yoh-Hei Takahashi; Ali Shilatifard
Journal:  Adv Enzyme Regul       Date:  2009-12-18

10.  Growth and development alter susceptibility to acute renal injury.

Authors:  Richard A Zager; Ali C M Johnson; Masayo Naito; Steve R Lund; Nayeon Kim; Karol Bomsztyk
Journal:  Kidney Int       Date:  2008-06-18       Impact factor: 10.612

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