Literature DB >> 17664433

Single-molecule fluorescence spectroscopy in (bio)catalysis.

Maarten B J Roeffaers1, Gert De Cremer, Hiroshi Uji-i, Benîot Muls, Bert F Sels, Pierre A Jacobs, Frans C De Schryver, Dirk E De Vos, Johan Hofkens.   

Abstract

The ever-improving time and space resolution and molecular detection sensitivity of fluorescence microscopy offer unique opportunities to deepen our insights into the function of chemical and biological catalysts. Because single-molecule microscopy allows for counting the turnover events one by one, one can map the distribution of the catalytic activities of different sites in solid heterogeneous catalysts, or one can study time-dependent activity fluctuations of individual sites in enzymes or chemical catalysts. By experimentally monitoring individuals rather than populations, the origin of complex behavior, e.g., in kinetics or in deactivation processes, can be successfully elucidated. Recent progress of temporal and spatial resolution in single-molecule fluorescence microscopy is discussed in light of its impact on catalytic assays. Key concepts are illustrated regarding the use of fluorescent reporters in catalytic reactions. Future challenges comprising the integration of other techniques, such as diffraction, scanning probe, or vibrational methods in single-molecule fluorescence spectroscopy are suggested.

Mesh:

Year:  2007        PMID: 17664433      PMCID: PMC1937513          DOI: 10.1073/pnas.0610755104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  55 in total

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2.  High-resolution near-field Raman microscopy of single-walled carbon nanotubes.

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3.  Host-guest antenna materials.

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4.  Single-enzyme kinetics of CALB-catalyzed hydrolysis.

Authors:  Kelly Velonia; Ophir Flomenbom; Davey Loos; Sadahiro Masuo; Mircea Cotlet; Yves Engelborghs; Johan Hofkens; Alan E Rowan; Joseph Klafter; Roeland J M Nolte; Frans C de Schryver
Journal:  Angew Chem Int Ed Engl       Date:  2005-01-14       Impact factor: 15.336

5.  Single molecule spectroscopy studies of diffusion in mesoporous silica thin films.

Authors:  Yi Fu; Fangmao Ye; William G Sanders; Maryanne M Collinson; Daniel A Higgins
Journal:  J Phys Chem B       Date:  2006-05-11       Impact factor: 2.991

6.  Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited.

Authors:  Brian P English; Wei Min; Antoine M van Oijen; Kang Taek Lee; Guobin Luo; Hongye Sun; Binny J Cherayil; S C Kou; X Sunney Xie
Journal:  Nat Chem Biol       Date:  2005-12-25       Impact factor: 15.040

7.  Direct monitoring of formation and dissociation of individual metal complexes by single-molecule fluorescence spectroscopy.

Authors:  Alexander Kiel; Janos Kovacs; Andriy Mokhir; Roland Krämer; Dirk-Peter Herten
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

8.  Near-field optics: microscopy, spectroscopy, and surface modification beyond the diffraction limit.

Authors:  E Betzig; J K Trautman
Journal:  Science       Date:  1992-07-10       Impact factor: 47.728

9.  In situ space- and time-resolved sorption kinetics of anionic dyes on individual LDH crystals.

Authors:  Maarten B J Roeffaers; Bert F Sels; Davey Loos; Christopher Kohl; Klaus Müllen; Pierre A Jacobs; Johan Hofkens; Dirk E De Vos
Journal:  Chemphyschem       Date:  2005-11-11       Impact factor: 3.102

10.  Searching for new reactivity (Nobel lecture).

Authors:  K Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2002-06-17       Impact factor: 15.336

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  12 in total

1.  Probing static disorder in Arrhenius kinetics by single-molecule force spectroscopy.

Authors:  Tzu-Ling Kuo; Sergi Garcia-Manyes; Jingyuan Li; Itay Barel; Hui Lu; Bruce J Berne; Michael Urbakh; Joseph Klafter; Julio M Fernández
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-08       Impact factor: 11.205

Review 2.  Heterogeneities of individual catalyst particles in space and time as monitored by spectroscopy.

Authors:  Inge L C Buurmans; Bert M Weckhuysen
Journal:  Nat Chem       Date:  2012-10-23       Impact factor: 24.427

3.  Observing Single-Molecule Dynamics at Millimolar Concentrations.

Authors:  Marcel P Goldschen-Ohm; David S White; Vadim A Klenchin; Baron Chanda; Randall H Goldsmith
Journal:  Angew Chem Int Ed Engl       Date:  2017-01-24       Impact factor: 15.336

4.  Contrasting the individual reactive pathways in protein unfolding and disulfide bond reduction observed within a single protein.

Authors:  Sergi Garcia-Manyes; Tzu-Ling Kuo; Julio M Fernández
Journal:  J Am Chem Soc       Date:  2011-02-10       Impact factor: 15.419

5.  Oligonucleotide-stabilized Ag nanocluster fluorophores.

Authors:  Chris I Richards; Sungmoon Choi; Jung-Cheng Hsiang; Yasuko Antoku; Tom Vosch; Angelo Bongiorno; Yih-Ling Tzeng; Robert M Dickson
Journal:  J Am Chem Soc       Date:  2008-03-18       Impact factor: 15.419

6.  Optical monitoring of polymerizations in droplets with high temporal dynamic range.

Authors:  Andrew C Cavell; Veronica K Krasecki; Guoping Li; Abhishek Sharma; Hao Sun; Matthew P Thompson; Christopher J Forman; Si Yue Guo; Riley J Hickman; Katherine A Parrish; Alán Aspuru-Guzik; Leroy Cronin; Nathan C Gianneschi; Randall H Goldsmith
Journal:  Chem Sci       Date:  2020-02-04       Impact factor: 9.825

7.  Quantitative 3D Fluorescence Imaging of Single Catalytic Turnovers Reveals Spatiotemporal Gradients in Reactivity of Zeolite H-ZSM-5 Crystals upon Steaming.

Authors:  Zoran Ristanović; Jan P Hofmann; Gert De Cremer; Alexey V Kubarev; Marcus Rohnke; Florian Meirer; Johan Hofkens; Maarten B J Roeffaers; Bert M Weckhuysen
Journal:  J Am Chem Soc       Date:  2015-04-13       Impact factor: 15.419

8.  Rationalizing inter- and intracrystal heterogeneities in dealuminated acid mordenite zeolites by stimulated Raman scattering microscopy correlated with super-resolution fluorescence microscopy.

Authors:  Kuan-Lin Liu; Alexey V Kubarev; Jordi Van Loon; Hiroshi Uji-i; Dirk E De Vos; Johan Hofkens; Maarten B J Roeffaers
Journal:  ACS Nano       Date:  2014-11-20       Impact factor: 15.881

Review 9.  Super-resolution molecular and functional imaging of nanoscale architectures in life and materials science.

Authors:  Satoshi Habuchi
Journal:  Front Bioeng Biotechnol       Date:  2014-06-12

10.  Rationalizing Acid Zeolite Performance on the Nanoscale by Correlative Fluorescence and Electron Microscopy.

Authors:  Jordi Van Loon; Kris P F Janssen; Thomas Franklin; Alexey V Kubarev; Julian A Steele; Elke Debroye; Eric Breynaert; Johan A Martens; Maarten B J Roeffaers
Journal:  ACS Catal       Date:  2017-06-22       Impact factor: 13.084

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