Literature DB >> 17660462

Blood-derived gene-expression profiling in unravelling susceptibility to recessive disease.

P Vahteristo1, A Kokko, O Saksela, K Aittomäki, L A Aaltonen.   

Abstract

Identification of new disease predisposition genes with chip-based technologies typically requires extensive financial and sample resources. We have recently shown that combining peripheral blood genome and transcriptome (BGT) information in highly selected materials can be a successful low-cost approach to unravelling dominant tumour susceptibility. In this study, we extended our investigations to recessively inherited tumour predisposition, and identified a homozygous germline mutation in the damage-specific DNA binding protein 2 (DDB2) gene in a patient with several facial tumours, for which doctors had been unable to provide a diagnosis. Our results provide proof of principle that BGT is a powerful approach for both dominant and recessive genes. In addition to tumour susceptibility, the method may be useful in characterising genetic defects underlying other disease phenotypes.

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Year:  2007        PMID: 17660462      PMCID: PMC2752178          DOI: 10.1136/jmg.2007.051342

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  12 in total

1.  Identification of a novel BBS gene (BBS12) highlights the major role of a vertebrate-specific branch of chaperonin-related proteins in Bardet-Biedl syndrome.

Authors:  Corinne Stoetzel; Jean Muller; Virginie Laurier; Erica E Davis; Norann A Zaghloul; Serge Vicaire; Cecile Jacquelin; Frederic Plewniak; Carmen C Leitch; Pierre Sarda; Christian Hamel; Thomy J L de Ravel; Richard Alan Lewis; Evelyne Friederich; Christelle Thibault; Jean-Marc Danse; Alain Verloes; Dominique Bonneau; Nicholas Katsanis; Olivier Poch; Jean-Louis Mandel; Helene Dollfus
Journal:  Am J Hum Genet       Date:  2006-11-15       Impact factor: 11.025

2.  Pituitary adenoma predisposition caused by germline mutations in the AIP gene.

Authors:  Outi Vierimaa; Marianthi Georgitsi; Rainer Lehtonen; Pia Vahteristo; Antti Kokko; Anniina Raitila; Karoliina Tuppurainen; Tapani M L Ebeling; Pasi I Salmela; Ralf Paschke; Sadi Gündogdu; Ernesto De Menis; Markus J Mäkinen; Virpi Launonen; Auli Karhu; Lauri A Aaltonen
Journal:  Science       Date:  2006-05-26       Impact factor: 47.728

3.  Reinvestigation of the classification of five cell strains of xeroderma pigmentosum group E with reclassification of three of them.

Authors:  T Itoh; S Linn; T Ono; M Yamaizumi
Journal:  J Invest Dermatol       Date:  2000-05       Impact factor: 8.551

4.  A newly identified patient with clinical xeroderma pigmentosum phenotype has a non-sense mutation in the DDB2 gene and incomplete repair in (6-4) photoproducts.

Authors:  T Itoh; T Mori; H Ohkubo; M Yamaizumi
Journal:  J Invest Dermatol       Date:  1999-08       Impact factor: 8.551

5.  p53 Binds and activates the xeroderma pigmentosum DDB2 gene in humans but not mice.

Authors:  Thomas Tan; Gilbert Chu
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

Review 6.  Cancer in xeroderma pigmentosum and related disorders of DNA repair.

Authors:  James E Cleaver
Journal:  Nat Rev Cancer       Date:  2005-07       Impact factor: 60.716

7.  An ancestral Ashkenazi haplotype at the HMPS/CRAC1 locus on 15q13-q14 is associated with hereditary mixed polyposis syndrome.

Authors:  E E M Jaeger; K L Woodford-Richens; M Lockett; A J Rowan; E J Sawyer; K Heinimann; P Rozen; V A Murday; S C Whitelaw; A Ginsberg; W S Atkin; H T Lynch; M C Southey; H Debinski; C Eng; W F Bodmer; I C Talbot; S V Hodgson; H J W Thomas; I P M Tomlinson
Journal:  Am J Hum Genet       Date:  2003-04-14       Impact factor: 11.025

8.  Down-regulation of the cytoglobin gene, located on 17q25, in tylosis with oesophageal cancer (TOC): evidence for trans-allele repression.

Authors:  Fiona E McRonald; Triantafillos Liloglou; George Xinarianos; Laura Hill; Lynn Rowbottom; Joanne E Langan; Anthony Ellis; Joan M Shaw; John K Field; Janet M Risk
Journal:  Hum Mol Genet       Date:  2006-03-01       Impact factor: 6.150

9.  Fine mapping of a putatively imprinted gene for familial non-chromaffin paragangliomas to chromosome 11q13.1: evidence for genetic heterogeneity.

Authors:  E C Mariman; S E van Beersum; C W Cremers; P M Struycken; H H Ropers
Journal:  Hum Genet       Date:  1995-01       Impact factor: 4.132

10.  True XP group E patients have a defective UV-damaged DNA binding protein complex and mutations in DDB2 which reveal the functional domains of its p48 product.

Authors:  Vesna Rapić-Otrin; Valentina Navazza; Tiziana Nardo; Elena Botta; Mary McLenigan; Dawn C Bisi; Arthur S Levine; Miria Stefanini
Journal:  Hum Mol Genet       Date:  2003-07-01       Impact factor: 6.150

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  4 in total

Review 1.  Pleiotropic functions of EAPII/TTRAP/TDP2: cancer development, chemoresistance and beyond.

Authors:  Chunyang Li; Shi-Yong Sun; Fadlo R Khuri; Runzhao Li
Journal:  Cell Cycle       Date:  2011-10-01       Impact factor: 4.534

Review 2.  A protein with broad functions: damage-specific DNA-binding protein 2.

Authors:  Ning Bao; Jiguang Han; Huimin Zhou
Journal:  Mol Biol Rep       Date:  2022-10-03       Impact factor: 2.742

3.  Association analyses of the interaction between the ADSS and ATM genes with schizophrenia in a Chinese population.

Authors:  Fuquan Zhang; Yong Xu; Pozi Liu; Hua Fan; Xuezhu Huang; Gaoxiang Sun; Yuqing Song; Pak C Sham
Journal:  BMC Med Genet       Date:  2008-12-30       Impact factor: 2.103

4.  An association study of ADSS gene polymorphisms with schizophrenia.

Authors:  Fuquan Zhang; Pak C Sham; Hua Fan; Yong Xu; Xuezhu Huang; Honcheong So; Yuqing Song; Pozi Liu
Journal:  Behav Brain Funct       Date:  2008-08-24       Impact factor: 3.759

  4 in total

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