Literature DB >> 17656321

Neoglycolipid probes prepared via oxime ligation for microarray analysis of oligosaccharide-protein interactions.

Yan Liu1, Ten Feizi, María A Campanero-Rhodes, Robert A Childs, Yibing Zhang, Barbara Mulloy, Philip G Evans, Helen M I Osborn, Diana Otto, Paul R Crocker, Wengang Chai.   

Abstract

Neoglycolipid technology is the basis of a microarray platform for assigning oligosaccharide ligands for carbohydrate-binding proteins. The strategy for generating the neoglycolipid probes by reductive amination results in ring opening of the core monosaccharides. This often limits applicability to short-chain saccharides, although the majority of recognition motifs are satisfactorily presented with neoglycolipids of longer oligosaccharides. Here, we describe neoglycolipids prepared by oxime ligation. We provide evidence from NMR studies that a significant proportion of the oxime-linked core monosaccharide is in the ring-closed form, and this form selectively interacts with a carbohydrate-binding protein. By microarray analyses we demonstrate the effective presentation with oxime-linked neoglycolipids of (1) Lewis(x) trisaccharide to antibodies to Lewis(x), (2) sialyllactose analogs to the sialic acid-binding receptors, siglecs, and (3) N-glycans to a plant lectin that requires an intact N-acetylglucosamine core.

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Year:  2007        PMID: 17656321     DOI: 10.1016/j.chembiol.2007.06.009

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  41 in total

1.  Bishydrazide glycoconjugates for lectin recognition and capture of bacterial pathogens.

Authors:  Avijit Kumar Adak; Alexei P Leonov; Ning Ding; Jyothi Thundimadathil; Sumith Kularatne; Philip S Low; Alexander Wei
Journal:  Bioconjug Chem       Date:  2010-10-06       Impact factor: 4.774

2.  A multifunctional anomeric linker for the chemoenzymatic synthesis of complex oligosaccharides.

Authors:  Anthony R Prudden; Zoeisha S Chinoy; Margreet A Wolfert; Geert-Jan Boons
Journal:  Chem Commun (Camb)       Date:  2014-07-11       Impact factor: 6.222

Review 3.  The neoglycolipid (NGL)-based oligosaccharide microarray system poised to decipher the meta-glycome.

Authors:  Angelina S Palma; Ten Feizi; Robert A Childs; Wengang Chai; Yan Liu
Journal:  Curr Opin Chem Biol       Date:  2014-02-07       Impact factor: 8.822

4.  Preparation and analysis of glycan microarrays.

Authors:  Jamie Heimburg-Molinaro; Xuezheng Song; David F Smith; Richard D Cummings
Journal:  Curr Protoc Protein Sci       Date:  2011-04

5.  Preparation of a mannose-6-phosphate glycan microarray through fluorescent derivatization, phosphorylation, and immobilization of natural high-mannose N-glycans and application in ligand identification of P-type lectins.

Authors:  Xuezheng Song; Jamie Heimburg-Molinaro; Nancy M Dahms; David F Smith; Richard D Cummings
Journal:  Methods Mol Biol       Date:  2012

6.  Defining the Interaction of Human Soluble Lectin ZG16p and Mycobacterial Phosphatidylinositol Mannosides.

Authors:  Shinya Hanashima; Sebastian Götze; Yan Liu; Akemi Ikeda; Kyoko Kojima-Aikawa; Naoyuki Taniguchi; Daniel Varón Silva; Ten Feizi; Peter H Seeberger; Yoshiki Yamaguchi
Journal:  Chembiochem       Date:  2015-06-11       Impact factor: 3.164

7.  Members of a novel protein family containing microneme adhesive repeat domains act as sialic acid-binding lectins during host cell invasion by apicomplexan parasites.

Authors:  Nikolas Friedrich; Joana M Santos; Yan Liu; Angelina S Palma; Ester Leon; Savvas Saouros; Makoto Kiso; Michael J Blackman; Stephen Matthews; Ten Feizi; Dominique Soldati-Favre
Journal:  J Biol Chem       Date:  2009-11-09       Impact factor: 5.157

8.  Synthesis of glycopolymers for microarray applications via ligation of reducing sugars to a poly(acryloyl hydrazide) scaffold.

Authors:  Kamil Godula; Carolyn R Bertozzi
Journal:  J Am Chem Soc       Date:  2010-07-28       Impact factor: 15.419

Review 9.  Glycan arrays: recent advances and future challenges.

Authors:  Oyindasola Oyelaran; Jeffrey C Gildersleeve
Journal:  Curr Opin Chem Biol       Date:  2009-07-20       Impact factor: 8.822

10.  Generation of a natural glycan microarray using 9-fluorenylmethyl chloroformate (FmocCl) as a cleavable fluorescent tag.

Authors:  Xuezheng Song; Yi Lasanajak; Carlos Rivera-Marrero; Anthony Luyai; Margaret Willard; David F Smith; Richard D Cummings
Journal:  Anal Biochem       Date:  2009-08-21       Impact factor: 3.365

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