Literature DB >> 17646174

High-resolution crystal structure of beta2-microglobulin formed at pH 7.0.

Kentaro Iwata1, Takanori Matsuura, Kazumasa Sakurai, Atsushi Nakagawa, Yuji Goto.   

Abstract

beta(2)-Microglobulin (beta2-m), a light chain of the major histocompatibility complex class I, forms amyloid fibrils in patients undergoing long-term haemodialysis, causing dialysis-related amyloidosis. Based on a comparison of the X-ray structure obtained at pH 5.7 and that of beta2-m in the histocompatibility complex, it has been proposed that the continuous D-strand observed in the crystal structure at pH 5.7 increases the propensity of beta2-m to self-associate via edge-to-edge interactions, thus initiating the formation of fibrils. To obtain further insight into the mechanism by which amyloid fibrils form, we determined the crystal structure of beta2-m at pH 7.0 at a resolution of up to 1.13 A. The crystal structure at pH 7.0 was basically the same as that at pH 5.6, suggesting that the conversion of the beta-bulge in strand D into a contiguous beta-strand is not unique to the crystals formed under slightly acidic conditions. In other words, although the formation of beta2-m fibrils was enhanced under acidic conditions, it remains unknown if it is related to the increased propensity for the disappearance of the beta-bulge in strand D. We consider that the enhanced fibrillation is more directly coupled with the decreased stability leading to the increased propensity of exposing amyloidogenic regions.

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Year:  2007        PMID: 17646174     DOI: 10.1093/jb/mvm148

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  15 in total

1.  Top-down study of β2-microglobulin deamidation.

Authors:  Xiaojuan Li; Xiang Yu; Catherine E Costello; Cheng Lin; Peter B O'Connor
Journal:  Anal Chem       Date:  2012-06-29       Impact factor: 6.986

2.  Magic angle spinning NMR analysis of beta2-microglobulin amyloid fibrils in two distinct morphologies.

Authors:  Galia T Debelouchina; Geoffrey W Platt; Marvin J Bayro; Sheena E Radford; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2010-08-04       Impact factor: 15.419

3.  Dynamics of free versus complexed β2-microglobulin and the evolution of interfaces in MHC class I molecules.

Authors:  Chee-Seng Hee; Monika Beerbaum; Bernhard Loll; Martin Ballaschk; Peter Schmieder; Barbara Uchanska-Ziegler; Andreas Ziegler
Journal:  Immunogenetics       Date:  2012-12-11       Impact factor: 2.846

4.  Delineating the conformational elements responsible for Cu(2+)-induced oligomerization of beta-2 microglobulin.

Authors:  Dorottya V Blaho; Andrew D Miranker
Journal:  Biochemistry       Date:  2009-07-21       Impact factor: 3.162

5.  Intermolecular alignment in β2-microglobulin amyloid fibrils.

Authors:  Galia T Debelouchina; Geoffrey W Platt; Marvin J Bayro; Sheena E Radford; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2010-11-15       Impact factor: 15.419

6.  Equilibrium unfolding thermodynamics of beta2-microglobulin analyzed through native-state H/D exchange.

Authors:  Enrico Rennella; Alessandra Corazza; Federico Fogolari; Paolo Viglino; Sofia Giorgetti; Monica Stoppini; Vittorio Bellotti; Gennaro Esposito
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

Review 7.  Understanding the complex mechanisms of β2-microglobulin amyloid assembly.

Authors:  Timo Eichner; Sheena E Radford
Journal:  FEBS J       Date:  2011-06-13       Impact factor: 5.542

8.  Secondary structure in the core of amyloid fibrils formed from human β₂m and its truncated variant ΔN6.

Authors:  Yongchao Su; Claire J Sarell; Matthew T Eddy; Galia T Debelouchina; Loren B Andreas; Clare L Pashley; Sheena E Radford; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2014-04-16       Impact factor: 15.419

9.  A regulatable switch mediates self-association in an immunoglobulin fold.

Authors:  Matthew F Calabrese; Catherine M Eakin; Jimin M Wang; Andrew D Miranker
Journal:  Nat Struct Mol Biol       Date:  2008-09       Impact factor: 15.369

10.  Structural and Thermodynamic Characteristics of Amyloidogenic Intermediates of β-2-Microglobulin.

Authors:  Song-Ho Chong; Jooyeon Hong; Sulgi Lim; Sunhee Cho; Jinkeong Lee; Sihyun Ham
Journal:  Sci Rep       Date:  2015-09-08       Impact factor: 4.379

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