Literature DB >> 17637049

Tautomerization of adenine facilitated by water: computational study of microsolvation.

Ho-Sung Kim1, Doo-Sik Ahn, Sang-Yoon Chung, Sang Kyu Kim, Sungyul Lee.   

Abstract

We present calculations for the mechanism and the barrier heights of tautomerization of adenine. We find various pathways for the 9(H) <--> 7(H) and 9(H) <--> 3(H) tautomerization. One mechanism for the 9(H) --> 7(H) tautomerization involves an sp(3)- or carbene-type intermediate, whereas the other proceeds via imine intermediates. Tautomerization from the 9(H) tautomer to 7(H) or 3(H) is predicted to occur with a very large activation barrier (60-70 kcal/mol), indicating that the processes may not occur readily in the gas phase. Interactions with the water molecule(s) are found to lower the barrier tremendously. We suggest that dramatic lowering of the 9(H) --> 3(H) and 9(H) --> 7(H) barriers by microsolvating water molecules may facilitate the formation and observation of the 7(H) and 3(H) tautomers in the solution phase.

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Year:  2007        PMID: 17637049     DOI: 10.1021/jp074229d

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

1.  A theoretical investigation on the proton transfer tautomerization mechanisms of 2-thioxanthine within microsolvent and long range solvent.

Authors:  Hong-Jiang Ren; Ke-He Su; Yan Liu; Xiao-Jun Li; Jun Xiao; Yan-Li Wang
Journal:  J Mol Model       Date:  2013-05-08       Impact factor: 1.810

2.  Microhydration of Deprotonated Nucleobases.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2016-05-13       Impact factor: 3.109

3.  Simulated Raman correlation spectroscopy for quantifying nucleic acid-silver composites.

Authors:  Lindsay M Freeman; Alexei Smolyaninov; Lin Pang; Yeshaiahu Fainman
Journal:  Sci Rep       Date:  2016-03-24       Impact factor: 4.379

4.  Non-poissonian Distribution of Point Mutations in DNA.

Authors:  Nigora Turaeva; Boris L Oksengendler
Journal:  Front Chem       Date:  2020-01-31       Impact factor: 5.221

  4 in total

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