Literature DB >> 17636967

Infrared spectroscopy of cationized lysine and epsilon-N-methyllysine in the gas phase: effects of alkali-metal ion size and proton affinity on zwitterion stability.

Matthew F Bush1, Matthew W Forbes, Rebecca A Jockusch, Jos Oomens, Nick C Polfer, Richard J Saykally, Evan R Williams.   

Abstract

The gas-phase structures of protonated and alkali-metal-cationized lysine (Lys) and epsilon-N-methyllysine (Lys(Me)) are investigated using infrared multiple photon dissociation (IRMPD) spectroscopy utilizing light generated by a free electron laser, in conjunction with ab initio calculations. IRMPD spectra of Lys.Li(+) and Lys.Na(+) are similar, but the spectrum for Lys.K(+) is different, indicating that the structure of lysine in these complexes depends on the metal ion size. The carbonyl stretch of a carboxylic acid group is clearly observed in each of these spectra, indicating that lysine is nonzwitterionic in these complexes. A detailed comparison of these spectra to those calculated for candidate low-energy structures indicates that the bonding motif for the metal ion changes from tricoordinated for Li and Na to dicoordinated for K, clearly revealing the increased importance of hydrogen-bonding relative to metal ion solvation with increasing metal ion size. Spectra for Lys(Me).M(+) show that Lys(Me), an analogue of lysine whose side chain contains a secondary amine, is nonzwitterionic with Li and zwitterionic with K and both forms are present for Na. The proton affinity of Lys(Me) is 16 kJ/mol higher than that of Lys; the higher proton affinity of a secondary amine can result in its preferential protonation and stabilization of the zwitterionic form.

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Year:  2007        PMID: 17636967     DOI: 10.1021/jp071902q

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  9 in total

1.  Experimental and theoretical investigation of the proton-bound dimer of lysine.

Authors:  Ronghu Wu; Richard A Marta; Jonathan K Martens; Kris R Eldridge; Terry B McMahon
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-22       Impact factor: 3.109

2.  IRPD spectroscopy and ensemble measurements: effects of different data acquisition and analysis methods.

Authors:  James S Prell; Jeremy T O'Brien; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-25       Impact factor: 3.109

3.  Identification and Partial Structural Characterization of Mass Isolated Valsartan and Its Metabolite with Messenger Tagging Vibrational Spectroscopy.

Authors:  Olga Gorlova; Sean M Colvin; Antonio Brathwaite; Fabian S Menges; Stephanie M Craig; Scott J Miller; Mark A Johnson
Journal:  J Am Soc Mass Spectrom       Date:  2017-08-11       Impact factor: 3.109

4.  Toward a Rational Design of Highly Folded Peptide Cation Conformations. 3D Gas-Phase Ion Structures and Ion Mobility Characterization.

Authors:  Robert Pepin; Kenneth J Laszlo; Aleš Marek; Bo Peng; Matthew F Bush; Helène Lavanant; Carlos Afonso; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2016-07-11       Impact factor: 3.109

5.  Gas-Phase Protonation Thermodynamics of Biological Lipids: Experiment, Theory, and Implications.

Authors:  Zachary M Miller; J Diana Zhang; W Alexander Donald; James S Prell
Journal:  Anal Chem       Date:  2020-07-19       Impact factor: 6.986

6.  Conformational analysis of glutamic acid: a density functional approach using implicit continuum solvent model.

Authors:  Başak Turan; Cenk Selçuki
Journal:  J Mol Model       Date:  2014-08-19       Impact factor: 1.810

7.  Unveiling host-guest-solvent interactions in solution by identifying highly unstable host-guest configurations in thermal non-equilibrium gas phase.

Authors:  Hyoju Choi; Young-Ho Oh; Soojin Park; Sung-Sik Lee; Han Bin Oh; Sungyul Lee
Journal:  Sci Rep       Date:  2022-05-17       Impact factor: 4.996

8.  Infrared Multiple Photon Dissociation Spectroscopy of Cationized Canavanine: Side-Chain Substitution Influences Gas-Phase Zwitterion Formation.

Authors:  Zachary M Smith; Vincent Steinmetz; Jonathan Martens; Jos Oomens; John C Poutsma
Journal:  Int J Mass Spectrom       Date:  2017-09-04       Impact factor: 1.986

9.  Infrared multiple photon dissociation spectroscopy of a gas-phase oxo-molybdenum complex with 1,2-dithiolene ligands.

Authors:  Michael J van Stipdonk; Partha Basu; Sara A Dille; John K Gibson; Giel Berden; Jos Oomens
Journal:  J Phys Chem A       Date:  2014-07-10       Impact factor: 2.781

  9 in total

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