Literature DB >> 1762915

An efficient, sequence-specific method for crosslinking complementary oligonucleotides using binuclear platinum complexes.

E S Gruff1, L E Orgel.   

Abstract

The binuclear PtII complexes [(trans-Pt(NH3)2Cl)2 (NH2(CH2)nNH2)]Cl2 (n = 4, 5 or 6), crosslink oligodeoxynucleotide-5'-phosphorothioates rapidly, specifically and efficiently to complementary single-stranded oligodeoxynucleotide targets. In the case that we investigated in detail, the most abundant crosslink is formed to the G residue complementary to the 5'-terminal C residue of the phosphorothioate. Less efficient crosslinking occurs to many other residues of the target. The same PtII complexes also bring about crosslinking efficiently to the polypurine tract in triple-helical DNA.

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Year:  1991        PMID: 1762915      PMCID: PMC329319          DOI: 10.1093/nar/19.24.6849

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  An indexed bibliography of antisense literature, 1978-1990.

Authors: 
Journal:  Antisense Res Dev       Date:  1991

2.  Optimization of the efficiency of cross-linking PtII oligonucleotide phosphorothioate complexes to complementary oligonucleotides.

Authors:  B C Chu; L E Orgel
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

3.  Thermal denaturation profiles and gel mobility shift analysis of oligodeoxynucleotide triplexes.

Authors:  R G Shea; P Ng; N Bischofberger
Journal:  Nucleic Acids Res       Date:  1990-08-25       Impact factor: 16.971

4.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

5.  Sequence-specific cleavage of double helical DNA by triple helix formation.

Authors:  H E Moser; P B Dervan
Journal:  Science       Date:  1987-10-30       Impact factor: 47.728

6.  Inhibition of DNA synthesis by cross-linking the template to platinum-thiol derivatives of complementary oligodeoxynucleotides.

Authors:  B C Chu; L E Orgel
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

7.  A simple procedure for cross-linking complementary oligonucleotides.

Authors:  B C Chu; L E Orgel
Journal:  DNA Cell Biol       Date:  1990 Jan-Feb       Impact factor: 3.311

8.  Use of exonuclease III to determine the site of stable lesions in defined sequences of DNA: the cyclobutane pyrimidine dimer and cis and trans dichlorodiammine platinum II examples.

Authors:  B Royer-Pokora; L K Gordon; W A Haseltine
Journal:  Nucleic Acids Res       Date:  1981-09-25       Impact factor: 16.971

9.  Accuracy of subcostal two-dimensional echocardiography in prospective diagnosis of total anomalous pulmonary venous connection.

Authors:  A J Chin; S P Sanders; F Sherman; P Lang; W I Norwood; A R Castaneda
Journal:  Am Heart J       Date:  1987-05       Impact factor: 4.749

  9 in total
  7 in total

1.  Site-specific platinum(II) cross-linking in a ribozyme active site.

Authors:  Erich G Chapman; Victoria J DeRose
Journal:  J Am Chem Soc       Date:  2011-12-14       Impact factor: 15.419

2.  Factors influencing the extent and selectivity of alkylation within triplexes by reactive G/A motif oligonucleotides.

Authors:  J N Lampe; I V Kutyavin; R Rhinehart; M W Reed; R B Meyer; H B Gamper
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

3.  Crosslinking of double-stranded oligonucleotides containing O-methyl-substituted pyrophosphate groups to the HNF1 transcription factor in nuclear cell extract.

Authors:  S A Kuznetsova; C Clusel; E Ugarte; I Elias; M Vasseur; M Blumenfeld; Z A Shabarova
Journal:  Nucleic Acids Res       Date:  1996-12-01       Impact factor: 16.971

4.  Interstrand cross-linking reaction in triplexes containing a monofunctional transplatin-adduct.

Authors:  C Colombier; B Lippert; M Leng
Journal:  Nucleic Acids Res       Date:  1996-11-15       Impact factor: 16.971

5.  Rapid and efficient hybridization-triggered crosslinking within a DNA duplex by an oligodeoxyribonucleotide bearing a conjugated cyclopropapyrroloindole.

Authors:  E A Lukhtanov; M A Podyminogin; I V Kutyavin; R B Meyer; H B Gamper
Journal:  Nucleic Acids Res       Date:  1996-02-15       Impact factor: 16.971

6.  A Click Chemistry Approach to Targeted DNA Crosslinking with cis-Platinum(II)-Modified Triplex-Forming Oligonucleotides.

Authors:  Joseph Hennessy; Bríonna McGorman; Zara Molphy; Nicholas P Farrell; Daniel Singleton; Tom Brown; Andrew Kellett
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-03       Impact factor: 16.823

7.  Characterisation of the DNA sequence specificity, cellular toxicity and cross-linking properties of novel bispyridine-based dinuclear platinum complexes.

Authors:  Ben W Johnson; Vincent Murray; Mark D Temple
Journal:  BMC Cancer       Date:  2016-05-25       Impact factor: 4.430

  7 in total

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