Literature DB >> 17624302

The R3H domain stabilizes poly(A)-specific ribonuclease by stabilizing the RRM domain.

Wei-Feng Liu1, Ao Zhang, Guang-Jun He, Yong-Bin Yan.   

Abstract

Poly(A)-specific ribonuclease (PARN), a key enzyme involved in eukaryotic mRNA decay, contains one catalytic domain and two RNA-binding domains. Here we found that at least one RNA-binding domain is required for the substrate binding, but not for the catalysis of PARN. The removal of the R3H domain led to a dramatic decrease in PARN stability and a change in the aggregation kinetic regime, while only minor effects were observed for the removal of the RRM domain or both RNA-binding domains. Thus the R3H domain might stabilize PARN by acting as a protector or intermolecular chaperone of the RRM domain.

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Year:  2007        PMID: 17624302     DOI: 10.1016/j.bbrc.2007.06.139

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  7 in total

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Authors:  Zhe Chen; Xiang-Jun Chen; Mengdie Xia; Hua-Wei He; Sha Wang; Huihui Liu; Haipeng Gong; Yong-Bin Yan
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

Review 2.  Kiss your tail goodbye: the role of PARN, Nocturnin, and Angel deadenylases in mRNA biology.

Authors:  Alan R Godwin; Shihoko Kojima; Carla B Green; Jeffrey Wilusz
Journal:  Biochim Biophys Acta       Date:  2012-12-26

3.  NFX1-123 increases hTERT expression and telomerase activity posttranscriptionally in human papillomavirus type 16 E6 keratinocytes.

Authors:  Rachel A Katzenellenbogen; Portia Vliet-Gregg; Mei Xu; Denise A Galloway
Journal:  J Virol       Date:  2009-04-15       Impact factor: 5.103

Review 4.  Dissimilar roles of the four conserved acidic residues in the thermal stability of poly(A)-specific ribonuclease.

Authors:  Guang-Jun He; Wei-Feng Liu; Yong-Bin Yan
Journal:  Int J Mol Sci       Date:  2011-05-03       Impact factor: 5.923

5.  A deadenylase assay by size-exclusion chromatography.

Authors:  Guang-Jun He; Yong-Bin Yan
Journal:  PLoS One       Date:  2012-03-19       Impact factor: 3.240

6.  The mRNA and miRNA transcriptomic landscape of Panax ginseng under the high ambient temperature.

Authors:  Inuk Jung; Hyejin Kang; Jang Uk Kim; Hyeonsook Chang; Sun Kim; Woosuk Jung
Journal:  BMC Syst Biol       Date:  2018-03-19

7.  Competition between translation initiation factor eIF5 and its mimic protein 5MP determines non-AUG initiation rate genome-wide.

Authors:  Leiming Tang; Jacob Morris; Ji Wan; Chelsea Moore; Yoshihiko Fujita; Sarah Gillaspie; Eric Aube; Jagpreet Nanda; Maud Marques; Maika Jangal; Abbey Anderson; Christian Cox; Hiroyuki Hiraishi; Leiming Dong; Hirohide Saito; Chingakham Ranjit Singh; Michael Witcher; Ivan Topisirovic; Shu-Bing Qian; Katsura Asano
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

  7 in total

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