Literature DB >> 17622584

Pre-spliceosomal binding of U1 small nuclear ribonucleoprotein (RNP) and heterogenous nuclear RNP E1 is associated with suppression of a growth hormone receptor pseudoexon.

Scott A Akker1, Shivani Misra, Shazad Aslam, Emma L Morgan, Philip J Smith, Bernard Khoo, Shern L Chew.   

Abstract

Pseudoexons occur frequently in the human genome. This paper characterizes a pseudoexon in the GH receptor gene. Inappropriate activation of this pseudoexon causes Laron syndrome. Using in vitro splicing assays, pseudoexon silencing was shown to require a combination of a weak 5' pseudosplice-site and splicing silencing elements within the pseudoexon. Immunoprecipitation experiments showed that specific binding of heterogenous nuclear ribonucleoprotein E1 (hnRNP E1) and U1 small nuclear ribonucleoprotein (snRNP) in the pre-spliceosomal complex was associated with silencing of pseudoexon splicing. The possible role of hnRNP E1 was further supported by RNA interference experiments in cultured cells. Immunoprecipitation experiments with three other pseudoexons suggested that pre-spliceosomal binding of U1 snRNP is a potential general mechanism of suppression of pseudoexons.

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Year:  2007        PMID: 17622584     DOI: 10.1210/me.2007-0038

Source DB:  PubMed          Journal:  Mol Endocrinol        ISSN: 0888-8809


  19 in total

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Review 4.  Heterogeneous nuclear ribonucleoproteins (hnRNPs) in cellular processes: Focus on hnRNP E1's multifunctional regulatory roles.

Authors:  Arindam Chaudhury; Praveen Chander; Philip H Howe
Journal:  RNA       Date:  2010-06-28       Impact factor: 4.942

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Authors:  Breege V Howley; Philip H Howe
Journal:  Cytokine       Date:  2018-02-01       Impact factor: 3.861

6.  The intronic splicing code: multiple factors involved in ATM pseudoexon definition.

Authors:  Ashish Dhir; Emanuele Buratti; Maria A van Santen; Reinhard Lührmann; Francisco E Baralle
Journal:  EMBO J       Date:  2010-01-21       Impact factor: 11.598

7.  The deep intronic c.903+469T>C mutation in the MTRR gene creates an SF2/ASF binding exonic splicing enhancer, which leads to pseudoexon activation and causes the cblE type of homocystinuria.

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8.  Genetic Defects in the Growth Hormone-IGF-I Axis Causing Growth Hormone Insensitivity and Impaired Linear Growth.

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Journal:  Front Endocrinol (Lausanne)       Date:  2011-12-12       Impact factor: 5.555

Review 9.  Lessons from non-canonical splicing.

Authors:  Christopher R Sibley; Lorea Blazquez; Jernej Ule
Journal:  Nat Rev Genet       Date:  2016-05-31       Impact factor: 53.242

10.  RNA-binding proteins and translational regulation in axons and growth cones.

Authors:  Hanna Hörnberg; Christine Holt
Journal:  Front Neurosci       Date:  2013-05-23       Impact factor: 4.677

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