Literature DB >> 17620725

Purification, crystallization and preliminary X-ray diffraction of the C-terminal bromodomain from human BRD2.

Takashi Umehara1, Masatoshi Wakamori, Akiko Tanaka, Balasundaram Padmanabhan, Shigeyuki Yokoyama.   

Abstract

BRD2 is a bromodomain-containing BET-family protein that associates with acetylated histones throughout the cell cycle. Although the tertiary structures of the bromodomains involved in histone acetyl transfer are already known, the structures of the BET-type bromodomains, which are required for tight association with acetylated chromatin, are poorly understood. Here, the expression, purification and crystallization of the C-terminal bromodomain of human BRD2 are reported. The protein was crystallized by the sitting-drop vapour-diffusion method in the orthorhombic space group P2(1)2(1)2, with unit-cell parameters a = 71.78, b = 52.60, c = 32.06 A and one molecule per asymmetric unit. The crystal diffracted beyond 1.80 A resolution using synchrotron radiation.

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Year:  2007        PMID: 17620725      PMCID: PMC2335128          DOI: 10.1107/S1744309107028473

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

Review 1.  Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome.

Authors:  R D Kornberg; Y Lorch
Journal:  Cell       Date:  1999-08-06       Impact factor: 41.582

2.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

Review 3.  Bromodomain: an acetyl-lysine binding domain.

Authors:  Lei Zeng; Ming Ming Zhou
Journal:  FEBS Lett       Date:  2002-02-20       Impact factor: 4.124

Review 4.  Histone acetyltransferases.

Authors:  S Y Roth; J M Denu; C D Allis
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

5.  A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition.

Authors:  A Dey; J Ellenberg; A Farina; A E Coleman; T Maruyama; S Sciortino; J Lippincott-Schwartz; K Ozato
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

6.  Selective recognition of acetylated histones by bromodomain proteins visualized in living cells.

Authors:  Tomohiko Kanno; Yuka Kanno; Richard M Siegel; Moon Kyoo Jang; Michael J Lenardo; Keiko Ozato
Journal:  Mol Cell       Date:  2004-01-16       Impact factor: 17.970

Review 7.  Histone and chromatin cross-talk.

Authors:  Wolfgang Fischle; Yanming Wang; C David Allis
Journal:  Curr Opin Cell Biol       Date:  2003-04       Impact factor: 8.382

8.  The bromodomain: a conserved sequence found in human, Drosophila and yeast proteins.

Authors:  S R Haynes; C Dollard; F Winston; S Beck; J Trowsdale; I B Dawid
Journal:  Nucleic Acids Res       Date:  1992-05-25       Impact factor: 16.971

9.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

10.  Crystal structure of the human BRD2 bromodomain: insights into dimerization and recognition of acetylated histone H4.

Authors:  Yoshihiro Nakamura; Takashi Umehara; Kazumi Nakano; Moon Kyoo Jang; Mikako Shirouzu; Satoshi Morita; Hiroko Uda-Tochio; Hiroaki Hamana; Takaho Terada; Naruhiko Adachi; Takehisa Matsumoto; Akiko Tanaka; Masami Horikoshi; Keiko Ozato; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Journal:  J Biol Chem       Date:  2006-12-05       Impact factor: 5.157

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  2 in total

1.  Structural implications for K5/K12-di-acetylated histone H4 recognition by the second bromodomain of BRD2.

Authors:  Takashi Umehara; Yoshihiro Nakamura; Masatoshi Wakamori; Keiko Ozato; Shigeyuki Yokoyama; Balasundaram Padmanabhan
Journal:  FEBS Lett       Date:  2010-08-13       Impact factor: 4.124

2.  Double bromodomain-containing gene Brd2 is essential for embryonic development in mouse.

Authors:  Enyuan Shang; Xiangyuan Wang; Duancheng Wen; David A Greenberg; Debra J Wolgemuth
Journal:  Dev Dyn       Date:  2009-04       Impact factor: 3.780

  2 in total

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