Literature DB >> 17617739

Cytosolic LC3 ratio as a sensitive index of macroautophagy in isolated rat hepatocytes and H4-II-E cells.

Md Razaul Karim1, Takumi Kanazawa, Yasuhiro Daigaku, Shinobu Fujimura, Giovanni Miotto, Motoni Kadowaki.   

Abstract

Macroautophagy, an intracellular bulk degradation process in eukaryotes, is sensitive to nutrient supply and deprivation. Microtubule-associated protein 1 light chain 3 (LC3), a mammalian homologue of yeast Atg8, plays an indispensable role in macroautophagy formation and is a suitable marker for this process. Through analysis of the subcellular distribution of LC3, we determined that the cytosolic fraction contained not only a precursor form (LC3-I), but also an apparent active form (LC3-IIs). Both cytosolic LC3-I and LC3-IIs were more responsive to amino acids than those of total homogenate. Moreover, changes in the LC3-IIs/I ratio reflected those in the total proteolytic flux remarkably in both fresh rat hepatocytes and H4-II-E cell lines. Thus, in addition to a sensitive index of macroautophagy, calculating the cytosolic LC3 ratio became an easy and quick quantitative method for monitoring its regulation in hepatocytes and H4-II-E cells.

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Year:  2007        PMID: 17617739     DOI: 10.4161/auto.4615

Source DB:  PubMed          Journal:  Autophagy        ISSN: 1554-8627            Impact factor:   16.016


  54 in total

1.  Nuclear LC3-positive puncta in stressed cells do not represent autophagosomes.

Authors:  Erin M Buckingham; John E Carpenter; Wallen Jackson; Charles Grose
Journal:  Biotechniques       Date:  2014-11-01       Impact factor: 1.993

2.  Cross talk between NADPH oxidase and autophagy in pulmonary artery endothelial cells with intrauterine persistent pulmonary hypertension.

Authors:  Ru-Jeng Teng; Jianhai Du; Scott Welak; Tongju Guan; Annie Eis; Yang Shi; Girija G Konduri
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2012-01-13       Impact factor: 5.464

3.  Nuclear LC3 Associates with Slowly Diffusing Complexes that Survey the Nucleolus.

Authors:  Lewis J Kraft; Pallavi Manral; Jacob Dowler; Anne K Kenworthy
Journal:  Traffic       Date:  2016-02-18       Impact factor: 6.215

4.  Mitochondrial clearance and maturation of autophagosomes are compromised in LRRK2 G2019S familial Parkinson's disease patient fibroblasts.

Authors:  Joanna A Korecka; Ria Thomas; Dan P Christensen; Anthony J Hinrich; Eliza J Ferrari; Simon A Levy; Michelle L Hastings; Penelope J Hallett; Ole Isacson
Journal:  Hum Mol Genet       Date:  2019-10-01       Impact factor: 6.150

5.  Quantitation of autophagy by luciferase release assay.

Authors:  Robin Ketteler; Brian Seed
Journal:  Autophagy       Date:  2008-06-03       Impact factor: 16.016

6.  3-Methyladenine and dexmedetomidine reverse lipopolysaccharide-induced acute lung injury through the inhibition of inflammation and autophagy.

Authors:  Dengfeng Ding; Shiyuan Xu; Hongfei Zhang; Wei Zhao; Xueping Zhang; Yuanxu Jiang; Ping Wang; Zhongliang Dai; Junzhi Zhang
Journal:  Exp Ther Med       Date:  2018-02-02       Impact factor: 2.447

7.  Type I interferon contributes to noncanonical inflammasome activation, mediates immunopathology, and impairs protective immunity during fatal infection with lipopolysaccharide-negative ehrlichiae.

Authors:  Qin Yang; Heather L Stevenson; Melanie J Scott; Nahed Ismail
Journal:  Am J Pathol       Date:  2014-12-04       Impact factor: 4.307

8.  Nucleocytoplasmic distribution and dynamics of the autophagosome marker EGFP-LC3.

Authors:  Kimberly R Drake; Minchul Kang; Anne K Kenworthy
Journal:  PLoS One       Date:  2010-03-23       Impact factor: 3.240

9.  Deoxycholate, an endogenous cytotoxin/genotoxin, induces the autophagic stress-survival pathway: implications for colon carcinogenesis.

Authors:  Claire M Payne; Cheray Crowley-Skillicorn; Hana Holubec; Katerina Dvorak; Carol Bernstein; Mary Pat Moyer; Harinder Garewal; Harris Bernstein
Journal:  J Toxicol       Date:  2009-05-10

10.  A tail-anchored myotonic dystrophy protein kinase isoform induces perinuclear clustering of mitochondria, autophagy, and apoptosis.

Authors:  Ralph J A Oude Ophuis; Mietske Wijers; Miranda B Bennink; Fons A J van de Loo; Jack A M Fransen; Bé Wieringa; Derick G Wansink
Journal:  PLoS One       Date:  2009-11-25       Impact factor: 3.240

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