Literature DB >> 17614346

Sub-picosecond mid-infrared spectroscopy of phytochrome Agp1 from Agrobacterium tumefaciens.

Christian Schumann1, Ruth Gross, Norbert Michael, Tilman Lamparter, Rolf Diller.   

Abstract

The photoinduced primary reaction of the biliverdin binding phytochrome Agp1 (Agp1-BV) from Agrobacterium tumefaciens was investigated by sub-picosecond time-resolved Vis pump-IR probe spectroscopy. Three time constants of tau(1)=0.7+/-0.05 ps, tau(2)=3.3+/-0.2 ps and tau(3)=33.3+/-1.5 ps could be isolated from the dynamics of structurally specific marker bands of the BV chromophore. These results together with those of accompanying sub-picosecond Vis pump-Vis probe spectroscopy allow the extension of the reaction scheme for the primary process by a vibrationally excited electronic ground state. The isomerization at the C15=C16 bond occurs within the lifetime of the excited electronic state. A quantum yield of 0.094 for the primary reaction is determined, suggesting that the quantum yield of formation of the P(fr) far-red-absorbing form is already established in the primary photoreaction of the P(r) (red-absorbing) form.

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Year:  2007        PMID: 17614346     DOI: 10.1002/cphc.200700210

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  22 in total

1.  The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.

Authors:  Chavdar Slavov; Tobias Fischer; Avishai Barnoy; Heewhan Shin; Aditya G Rao; Christian Wiebeler; Xiaoli Zeng; Yafang Sun; Qianzhao Xu; Alexander Gutt; Kai-Hong Zhao; Wolfgang Gärtner; Xiaojing Yang; Igor Schapiro; Josef Wachtveitl
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-26       Impact factor: 11.205

2.  Structure-guided engineering enhances a phytochrome-based infrared fluorescent protein.

Authors:  Michele E Auldridge; Kenneth A Satyshur; David M Anstrom; Katrina T Forest
Journal:  J Biol Chem       Date:  2011-12-30       Impact factor: 5.157

3.  Conformational homogeneity and excited-state isomerization dynamics of the bilin chromophore in phytochrome Cph1 from resonance Raman intensities.

Authors:  Katelyn M Spillane; Jyotishman Dasgupta; Richard A Mathies
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

4.  Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome.

Authors:  K C Toh; Emina A Stojkovic; Ivo H M van Stokkum; Keith Moffat; John T M Kennis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-30       Impact factor: 11.205

5.  Subpicosecond midinfrared spectroscopy of the Pfr reaction of phytochrome Agp1 from Agrobacterium tumefaciens.

Authors:  Christian Schumann; Ruth Gross; Matthias M N Wolf; Rolf Diller; Norbert Michael; Tilman Lamparter
Journal:  Biophys J       Date:  2008-01-11       Impact factor: 4.033

6.  Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy.

Authors:  Jyotishman Dasgupta; Renee R Frontiera; Keenan C Taylor; J Clark Lagarias; Richard A Mathies
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-29       Impact factor: 11.205

7.  Unusual spectral properties of bacteriophytochrome Agp2 result from a deprotonation of the chromophore in the red-absorbing form Pr.

Authors:  Benjamin Zienicke; Isabel Molina; René Glenz; Patrick Singer; Dorothee Ehmer; Francisco Velazquez Escobar; Peter Hildebrandt; Rolf Diller; Tilman Lamparter
Journal:  J Biol Chem       Date:  2013-09-13       Impact factor: 5.157

8.  A polarity probe for monitoring light-induced structural changes at the entrance of the chromophore pocket in a bacterial phytochrome.

Authors:  Berthold Borucki; Tilman Lamparter
Journal:  J Biol Chem       Date:  2009-07-29       Impact factor: 5.157

9.  Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction.

Authors:  Xiaojing Yang; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-17       Impact factor: 11.205

10.  Homogeneity of phytochrome Cph1 vibronic absorption revealed by resonance Raman intensity analysis.

Authors:  Katelyn M Spillane; Jyotishman Dasgupta; J Clark Lagarias; Richard A Mathies
Journal:  J Am Chem Soc       Date:  2009-10-07       Impact factor: 15.419

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