Literature DB >> 17614132

Convergent Functional Genomics of bipolar disorder: from animal model pharmacogenomics to human genetics and biomarkers.

H Le-Niculescu1, M J McFarland, S Mamidipalli, C A Ogden, R Kuczenski, S M Kurian, D R Salomon, Ming T Tsuang, J I Nurnberger, A B Niculescu.   

Abstract

Progress in understanding the genetic and neurobiological basis of bipolar disorder(s) has come from both human studies and animal model studies. Until recently, the lack of concerted integration between the two approaches has been hindering the pace of discovery, or more exactly, constituted a missed opportunity to accelerate our understanding of this complex and heterogeneous group of disorders. Our group has helped overcome this "lost in translation" barrier by developing an approach called convergent functional genomics (CFG). The approach integrates animal model gene expression data with human genetic linkage/association data, as well as human tissue (postmortem brain, blood) data. This Bayesian strategy for cross-validating findings extracts meaning from large datasets, and prioritizes candidate genes, pathways and mechanisms for subsequent targeted, hypothesis-driven research. The CFG approach may also be particularly useful for identification of blood biomarkers of the illness.

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Year:  2007        PMID: 17614132      PMCID: PMC3313450          DOI: 10.1016/j.neubiorev.2007.05.008

Source DB:  PubMed          Journal:  Neurosci Biobehav Rev        ISSN: 0149-7634            Impact factor:   8.989


  52 in total

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Authors:  M Mas Nieto; S L E Guen; B L Kieffer; B P Roques; F Noble
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2.  Expression of MBP, PLP, MAG, CNP, and GFAP in the Human Alcoholic Brain.

Authors:  Joanne M Lewohl; Julie Wixey; Clive G Harper; Peter R Dodd
Journal:  Alcohol Clin Exp Res       Date:  2005-09       Impact factor: 3.455

3.  Regulation of gene expression by lithium and depletion of inositol in slices of adult rat cortex.

Authors:  Philip E Brandish; Ming Su; Daniel J Holder; Paul Hodor; John Szumiloski; Robert R Kleinhanz; Jaime E Forbes; Mollie E McWhorter; Sven J Duenwald; Mark L Parrish; Sang Na; Yuan Liu; Robert L Phillips; John J Renger; Sethu Sankaranarayanan; Adam J Simon; Edward M Scolnick
Journal:  Neuron       Date:  2005-03-24       Impact factor: 17.173

4.  Towards understanding the schizophrenia code: an expanded convergent functional genomics approach.

Authors:  H Le-Niculescu; Y Balaraman; S Patel; J Tan; K Sidhu; R E Jerome; H J Edenberg; R Kuczenski; M A Geyer; J I Nurnberger; S V Faraone; M T Tsuang; A B Niculescu
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2007-03-05       Impact factor: 3.568

5.  Identification of additional variants within the human dopamine transporter gene provides further evidence for an association with bipolar disorder in two independent samples.

Authors:  T A Greenwood; N J Schork; E Eskin; J R Kelsoe
Journal:  Mol Psychiatry       Date:  2006-02       Impact factor: 15.992

6.  Assessing the validity of blood-based gene expression profiles for the classification of schizophrenia and bipolar disorder: a preliminary report.

Authors:  Ming T Tsuang; Nadine Nossova; Tom Yager; Min-Min Tsuang; Shi-Chin Guo; Kou Ge Shyu; Stephen J Glatt; C C Liew
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2005-02-05       Impact factor: 3.568

Review 7.  White matter changes in schizophrenia: evidence for myelin-related dysfunction.

Authors:  Kenneth L Davis; Daniel G Stewart; Joseph I Friedman; Monte Buchsbaum; Philip D Harvey; Patrick R Hof; Joseph Buxbaum; Vahram Haroutunian
Journal:  Arch Gen Psychiatry       Date:  2003-05

8.  Novel integrative genomics strategies to identify genes for complex traits.

Authors:  E E Schadt
Journal:  Anim Genet       Date:  2006-08       Impact factor: 3.169

9.  Mania-like behavior induced by disruption of CLOCK.

Authors:  Kole Roybal; David Theobold; Ami Graham; Jennifer A DiNieri; Scott J Russo; Vaishnav Krishnan; Sumana Chakravarty; Joseph Peevey; Nathan Oehrlein; Shari Birnbaum; Martha H Vitaterna; Paul Orsulak; Joseph S Takahashi; Eric J Nestler; William A Carlezon; Colleen A McClung
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-22       Impact factor: 11.205

10.  Genome scan meta-analysis of schizophrenia and bipolar disorder, part II: Schizophrenia.

Authors:  Cathryn M Lewis; Douglas F Levinson; Lesley H Wise; Lynn E DeLisi; Richard E Straub; Iiris Hovatta; Nigel M Williams; Sibylle G Schwab; Ann E Pulver; Stephen V Faraone; Linda M Brzustowicz; Charles A Kaufmann; David L Garver; Hugh M D Gurling; Eva Lindholm; Hilary Coon; Hans W Moises; William Byerley; Sarah H Shaw; Andrea Mesen; Robin Sherrington; F Anthony O'Neill; Dermot Walsh; Kenneth S Kendler; Jesper Ekelund; Tiina Paunio; Jouko Lönnqvist; Leena Peltonen; Michael C O'Donovan; Michael J Owen; Dieter B Wildenauer; Wolfgang Maier; Gerald Nestadt; Jean-Louis Blouin; Stylianos E Antonarakis; Bryan J Mowry; Jeremy M Silverman; Raymond R Crowe; C Robert Cloninger; Ming T Tsuang; Dolores Malaspina; Jill M Harkavy-Friedman; Dragan M Svrakic; Anne S Bassett; Jennifer Holcomb; Gursharan Kalsi; Andrew McQuillin; Jon Brynjolfson; Thordur Sigmundsson; Hannes Petursson; Elena Jazin; Tomas Zoëga; Tomas Helgason
Journal:  Am J Hum Genet       Date:  2003-06-11       Impact factor: 11.025

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  23 in total

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Authors:  Rima Hajjo; Vincent Setola; Bryan L Roth; Alexander Tropsha
Journal:  J Med Chem       Date:  2012-06-11       Impact factor: 7.446

Review 2.  Animal models of bipolar disorder and mood stabilizer efficacy: a critical need for improvement.

Authors:  Todd D Gould; Haim Einat
Journal:  Neurosci Biobehav Rev       Date:  2007-05-31       Impact factor: 8.989

Review 3.  Genetics of bipolar disorder.

Authors:  Jordan W Smoller; Erica Gardner-Schuster
Journal:  Curr Psychiatry Rep       Date:  2007-12       Impact factor: 5.285

4.  Pathways-based analyses of whole-genome association study data in bipolar disorder reveal genes mediating ion channel activity and synaptic neurotransmission.

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Journal:  Hum Genet       Date:  2008-12-04       Impact factor: 4.132

Review 5.  Search for genetic markers and functional variants involved in the development of opiate and cocaine addiction and treatment.

Authors:  Vadim Yuferov; Orna Levran; Dmitri Proudnikov; David A Nielsen; Mary Jeanne Kreek
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6.  Identification of a Bipolar Disorder Vulnerable Gene CHDH at 3p21.1.

Authors:  Hong Chang; Lingyi Li; Tao Peng; Maria Grigoroiu-Serbanescu; Sarah E Bergen; Mikael Landén; Christina M Hultman; Andreas J Forstner; Jana Strohmaier; Julian Hecker; Thomas G Schulze; Bertram Müller-Myhsok; Andreas Reif; Philip B Mitchell; Nicholas G Martin; Sven Cichon; Markus M Nöthen; Stéphane Jamain; Marion Leboyer; Frank Bellivier; Bruno Etain; Jean-Pierre Kahn; Chantal Henry; Marcella Rietschel; Xiao Xiao; Ming Li
Journal:  Mol Neurobiol       Date:  2016-08-25       Impact factor: 5.590

7.  An E3 ubiquitin ligase, Really Interesting New Gene (RING) Finger 41, is a candidate gene for anxiety-like behavior and beta-carboline-induced seizures.

Authors:  Sanghyeon Kim; Shumin Zhang; Kwang H Choi; Robin Reister; Chi Do; Ali F Baykiz; Howard K Gershenfeld
Journal:  Biol Psychiatry       Date:  2008-11-04       Impact factor: 13.382

8.  Biomarkers in psychiatry: drawbacks and potential for misuse.

Authors:  Shaheen E Lakhan; Karen Vieira; Elissa Hamlat
Journal:  Int Arch Med       Date:  2010-01-12

9.  A functional haplotype implicated in vulnerability to develop cocaine dependence is associated with reduced PDYN expression in human brain.

Authors:  Vadim Yuferov; Fei Ji; David A Nielsen; Orna Levran; Ann Ho; Susan Morgello; Ruijin Shi; Jurg Ott; Mary Jeanne Kreek
Journal:  Neuropsychopharmacology       Date:  2008-10-15       Impact factor: 7.853

10.  Variants in doublecortin- and calmodulin kinase like 1, a gene up-regulated by BDNF, are associated with memory and general cognitive abilities.

Authors:  Stéphanie Le Hellard; Bjarte Håvik; Thomas Espeseth; Harald Breilid; Roger Løvlie; Michelle Luciano; Alan J Gow; Sarah E Harris; John M Starr; Karin Wibrand; Astri J Lundervold; David J Porteous; Clive R Bramham; Ian J Deary; Ivar Reinvang; Vidar M Steen
Journal:  PLoS One       Date:  2009-10-21       Impact factor: 3.240

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