Literature DB >> 17612775

First detection of a human astrovirus type 8 in a child with diarrhea in Belém, Brazil: comparison with other strains worldwide and identification of possible three lineages.

Yvone B Gabbay1, Alexandre C Linhares, Darleise S Oliveira, Lilian S Nakamura, Joana D'Arc P Mascarenhas, Rosa Helena P Gusmão, Marcos B Heinemann, Olinda Macêdo, José Paulo G Leite.   

Abstract

This study describes the genetic relationships of the first human astrovirus type-8 (HAstV-8) detected in Belém-Brazil, during a public hospital-based study. This strain was compared with other HAstV-8 strains identified elsewhere which have sequences available at GeneBank. The regions ORF1a (primers Mon348/Mon340) and ORF2 (primers Mon269/Mon270) were analyzed by nucleotide sequencing and a high similarity rate was observed among the Belém strain and other HAstV-8 strains. In ORF1a, homology values of 93-100% were detected, and in ORF2 96-99%. Considering the sequence variation (7%) observed in ORF2 region, it was suggested that HAstV-8 strains could be divided in three different lineages.

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Year:  2007        PMID: 17612775     DOI: 10.1590/s0074-02762007005000032

Source DB:  PubMed          Journal:  Mem Inst Oswaldo Cruz        ISSN: 0074-0276            Impact factor:   2.743


  3 in total

1.  High variety of known and new RNA and DNA viruses of diverse origins in untreated sewage.

Authors:  Terry Fei Fan Ng; Rachel Marine; Chunlin Wang; Peter Simmonds; Beatrix Kapusinszky; Ladaporn Bodhidatta; Bamidele Soji Oderinde; K Eric Wommack; Eric Delwart
Journal:  J Virol       Date:  2012-08-29       Impact factor: 5.103

2.  Environmental Assessment of Classical Human Astrovirus in Uruguay.

Authors:  A Lizasoain; L F L Tort; M García; M M Gómez; J Cristina; J P G Leite; M P Miagostovich; M Victoria; R Colina
Journal:  Food Environ Virol       Date:  2015-02-14       Impact factor: 2.778

3.  Multiple novel astrovirus species in human stool.

Authors:  A Kapoor; L Li; J Victoria; B Oderinde; C Mason; P Pandey; S Z Zaidi; E Delwart
Journal:  J Gen Virol       Date:  2009-08-19       Impact factor: 3.891

  3 in total

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