Literature DB >> 17610305

myProMS, a web server for management and validation of mass spectrometry-based proteomic data.

Patrick Poullet1, Sabrina Carpentier, Emmanuel Barillot.   

Abstract

Curation and interpretation of protein databank-search results by human experts are key aspects of MS-based proteomic data acquisition. These tasks are often overlooked due to the vast amount of data to inspect. We have developed myProMS, a web server designed to ease search results validation and interpretation by improving data organization, mining and sharing between MS specialists and biologists during MS-based collaborative projects. A demo is accessible at http://bioinfo.curie.fr/myproms.

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Year:  2007        PMID： 17610305     DOI： 10.1002/pmic.200600784

Source DB:  PubMed          Journal:  Proteomics        ISSN： 1615-9853            Impact factor:   3.984


  59 in total

1.  Proteomic comparison defines novel markers to characterize heterogeneous populations of extracellular vesicle subtypes.

Authors:  Joanna Kowal; Guillaume Arras; Marina Colombo; Mabel Jouve; Jakob Paul Morath; Bjarke Primdal-Bengtson; Florent Dingli; Damarys Loew; Mercedes Tkach; Clotilde Théry
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-08       Impact factor: 11.205

2.  Shigella promotes major alteration of gut epithelial physiology and tissue invasion by shutting off host intracellular transport.

Authors:  Mariana L Ferrari; Valérie Malardé; Alexandre Grassart; Laura Salavessa; Giulia Nigro; Stéphane Descorps-Declere; John R Rohde; Pamela Schnupf; Vanessa Masson; Guillaume Arras; Damarys Loew; Philippe J Sansonetti; Nathalie Sauvonnet
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-17       Impact factor: 11.205

3.  The Q-soluble N-Ethylmaleimide-sensitive Factor Attachment Protein Receptor (Q-SNARE) SNAP-47 Regulates Trafficking of Selected Vesicle-associated Membrane Proteins (VAMPs).

Authors:  Aurelia Kuster; Sebastien Nola; Florent Dingli; Barbara Vacca; Christian Gauchy; Jean-Claude Beaujouan; Marcela Nunez; Thomas Moncion; Damarys Loew; Etienne Formstecher; Thierry Galli; Veronique Proux-Gillardeaux
Journal:  J Biol Chem       Date:  2015-09-10       Impact factor: 5.157

4.  SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatin.

Authors:  Christèle Maison; Delphine Bailly; Danièle Roche; Rocio Montes de Oca; Aline V Probst; Isabelle Vassias; Florent Dingli; Bérengère Lombard; Damarys Loew; Jean-Pierre Quivy; Geneviève Almouzni
Journal:  Nat Genet       Date:  2011-02-13       Impact factor: 38.330

5.  Benzoquinone, a leukemogenic metabolite of benzene, catalytically inhibits the protein tyrosine phosphatase PTPN2 and alters STAT1 signaling.

Authors:  Romain Duval; Linh-Chi Bui; Cécile Mathieu; Qing Nian; Jérémy Berthelet; Ximing Xu; Iman Haddad; Joelle Vinh; Jean-Marie Dupret; Florent Busi; Fabien Guidez; Christine Chomienne; Fernando Rodrigues-Lima
Journal:  J Biol Chem       Date:  2019-06-27       Impact factor: 5.157

6.  Pom33, a novel transmembrane nucleoporin required for proper nuclear pore complex distribution.

Authors:  Anne Chadrin; Barbara Hess; Mabel San Roman; Xavier Gatti; Bérangère Lombard; Damarys Loew; Yves Barral; Benoit Palancade; Valérie Doye
Journal:  J Cell Biol       Date:  2010-05-24       Impact factor: 10.539

7.  Cdk5 induces constitutive activation of 5-HT6 receptors to promote neurite growth.

Authors:  Fanny Duhr; Paul Déléris; Fabrice Raynaud; Martial Séveno; Séverine Morisset-Lopez; Clotilde Mannoury la Cour; Mark J Millan; Joël Bockaert; Philippe Marin; Séverine Chaumont-Dubel
Journal:  Nat Chem Biol       Date:  2014-06-01       Impact factor: 15.040

8.  Identification of genes required for Mycobacterium abscessus growth in vivo with a prominent role of the ESX-4 locus.

Authors:  Laura Laencina; Violaine Dubois; Vincent Le Moigne; Albertus Viljoen; Laleh Majlessi; Justin Pritchard; Audrey Bernut; Laura Piel; Anne-Laure Roux; Jean-Louis Gaillard; Bérengère Lombard; Damarys Loew; Eric J Rubin; Roland Brosch; Laurent Kremer; Jean-Louis Herrmann; Fabienne Girard-Misguich
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-17       Impact factor: 11.205

9.  Galectin-3 drives glycosphingolipid-dependent biogenesis of clathrin-independent carriers.

Authors:  Ramya Lakshminarayan; Christian Wunder; Ulrike Becken; Mark T Howes; Carola Benzing; Senthil Arumugam; Susanne Sales; Nicholas Ariotti; Valérie Chambon; Christophe Lamaze; Damarys Loew; Andrej Shevchenko; Katharina Gaus; Robert G Parton; Ludger Johannes
Journal:  Nat Cell Biol       Date:  2014-05-18       Impact factor: 28.824

10.  Reciprocal regulation of Aurora kinase A and ATIP3 in the control of metaphase spindle length.

Authors:  Anne Nehlig; Cynthia Seiler; Yulia Steblyanko; Florent Dingli; Guillaume Arras; Damarys Loew; Julie Welburn; Claude Prigent; Marin Barisic; Clara Nahmias
Journal:  Cell Mol Life Sci       Date:  2020-08-13       Impact factor: 9.261
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