Literature DB >> 17610146

Question 3: the worlds of the prebiotic and never born proteins.

Cristiano Chiarabelli1, Davide De Lucrezia.   

Abstract

Starting from the statement that no reliable methods are known to produce high molecular weight polypeptides under prebiotic conditions, a possible approach, at least to understand the differences between extant proteins and the possible large number of never born proteins, could be biological. Using the phage display method a large library of totally random amino acidic sequences was obtained. Consequently, different experiments to directly consider the frequency of stable folds were performed, and the interesting results obtained from such new approach are discussed in terms of contingency, contributing to the discussion on the selection mechanism of extant proteins.

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Year:  2007        PMID: 17610146     DOI: 10.1007/s11084-007-9075-4

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  9 in total

1.  N-carbamoyl amino acid solid-gas nitrosation by NO/NOx: A new route to oligopeptides via alpha-amino acid N-carboxyanhydride. Prebiotic implications.

Authors:  J Taillades; H Collet; L Garrel; I Beuzelin; L Boiteau; H Choukroun; A Commeyras
Journal:  J Mol Evol       Date:  1999-06       Impact factor: 2.395

2.  Synthesis of polypeptides by microwave heating I. Formation of polypeptides during repeated hydration-dehydration cycles and their characterization.

Authors:  H Yanagawa; K Kojima; M Ito; N Handa
Journal:  J Mol Evol       Date:  1990-09       Impact factor: 2.395

3.  Investigation of de novo totally random biosequences, Part II: On the folding frequency in a totally random library of de novo proteins obtained by phage display.

Authors:  Cristiano Chiarabelli; Jan W Vrijbloed; Davide De Lucrezia; Richard M Thomas; Pasquale Stano; Fabio Polticelli; Tiziana Ottone; Ester Papa; Pier Luigi Luisi
Journal:  Chem Biodivers       Date:  2006-08       Impact factor: 2.408

4.  Polymerization on the rocks: negatively-charged alpha-amino acids.

Authors:  A R Hill; C Böhler; L E Orgel
Journal:  Orig Life Evol Biosph       Date:  1998-06       Impact factor: 1.950

5.  Investigation of de novo totally random biosequences, Part I: A general method for in vitro selection of folded domains from a random polypeptide library displayed on phage.

Authors:  Cristiano Chiarabelli; Jan W Vrijbloed; Richard M Thomas; Pier Luigi Luisi
Journal:  Chem Biodivers       Date:  2006-08       Impact factor: 2.408

6.  The combination of salt induced peptide formation reaction and clay catalysis: a way to higher peptides under primitive earth conditions.

Authors:  B M Rode; H L Son; Y Suwannachot
Journal:  Orig Life Evol Biosph       Date:  1999-05       Impact factor: 1.950

7.  Polymerization on the rocks: beta-amino acids and arginine.

Authors:  R Liu; L E Orgel
Journal:  Orig Life Evol Biosph       Date:  1998-06       Impact factor: 1.950

8.  Evaporation cycle experiments--a simulation of salt-induced peptide synthesis under possible prebiotic conditions.

Authors:  S Saetia; K R Liedl; A H Eder; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1993-06       Impact factor: 1.950

9.  The polymerization of amino acid adenylates on sodium-montmorillonite with preadsorbed polypeptides.

Authors:  M Paecht-Horowitz; F R Eirich
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

  9 in total
  2 in total

1.  Do natural proteins differ from random sequences polypeptides? Natural vs. random proteins classification using an evolutionary neural network.

Authors:  Davide De Lucrezia; Debora Slanzi; Irene Poli; Fabio Polticelli; Giovanni Minervini
Journal:  PLoS One       Date:  2012-05-16       Impact factor: 3.240

2.  How much of protein sequence space has been explored by life on Earth?

Authors:  David T F Dryden; Andrew R Thomson; John H White
Journal:  J R Soc Interface       Date:  2008-08-06       Impact factor: 4.118

  2 in total

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